Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.34□□□□□ -2.46
NPHP1O15259 RNU6-758P-201ENST00000516292 89 ntBASIC-0.34□□□□□ -2.46
NPHP1O15259 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 MT-TR-201ENST00000387439 65 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 Z95118.1-201ENST00000421372 247 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 RNU6-175P-201ENST00000516896 107 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 AL513043.2-201ENST00000573941 143 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 MIR548O2-201ENST00000616090 70 ntBASIC-0.35□□□□□ -2.47
NPHP1O15259 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.36□□□□□ -2.47
NPHP1O15259 MIR6507-201ENST00000613630 70 ntBASIC-0.36□□□□□ -2.47
NPHP1O15259 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.37□□□□□ -2.47
NPHP1O15259 SNORD49B-201ENST00000365172 72 ntBASIC-0.37□□□□□ -2.47
NPHP1O15259 RNY4P3-201ENST00000365254 95 ntBASIC-0.37□□□□□ -2.47
NPHP1O15259 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.37□□□□□ -2.47
NPHP1O15259 RNU6-65P-201ENST00000516332 98 ntBASIC-0.37□□□□□ -2.47
NPHP1O15259 MIR4536-1-201ENST00000583537 88 ntBASIC-0.37□□□□□ -2.47
NPHP1O15259 RNU6-880P-201ENST00000384526 107 ntBASIC-0.38□□□□□ -2.47
NPHP1O15259 RNU6-813P-201ENST00000384691 107 ntBASIC-0.38□□□□□ -2.47
NPHP1O15259 RNU7-85P-201ENST00000458851 63 ntBASIC-0.38□□□□□ -2.47
NPHP1O15259 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 MIR451A-201ENST00000385059 72 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 MIR652-201ENST00000385278 98 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 AC244250.2-201ENST00000418731 148 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.39□□□□□ -2.47
NPHP1O15259 MIR655-201ENST00000362159 97 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 MIR20A-201ENST00000362279 71 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 RNU4-36P-201ENST00000364294 144 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 SNORD116-21-201ENST00000384507 92 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 RNU6-644P-201ENST00000391155 98 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 U3.27-201ENST00000391237 200 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 RNA5SP25-201ENST00000410815 110 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 MIR4645-201ENST00000583158 77 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 AC103810.7-201ENST00000607821 91 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
NPHP1O15259 RNU6-811P-201ENST00000384069 107 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 RNU6-959P-201ENST00000384671 107 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 MIR604-201ENST00000384880 94 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 RNU6-412P-201ENST00000516434 106 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 MIR4777-201ENST00000583710 86 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.41□□□□□ -2.48
NPHP1O15259 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.42□□□□□ -2.48
NPHP1O15259 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.42□□□□□ -2.48
NPHP1O15259 RNA5SP300-201ENST00000391197 107 ntBASIC-0.42□□□□□ -2.48
NPHP1O15259 AC244090.1-201ENST00000441884 93 ntBASIC-0.42□□□□□ -2.48
NPHP1O15259 snoU13.19-201ENST00000459148 104 ntBASIC-0.42□□□□□ -2.48
NPHP1O15259 RNA5SP205-201ENST00000364653 136 ntBASIC-0.43□□□□□ -2.48
NPHP1O15259 RNU6-30P-201ENST00000384561 107 ntBASIC-0.43□□□□□ -2.48
NPHP1O15259 MIR548Z-201ENST00000584743 97 ntBASIC-0.43□□□□□ -2.48
NPHP1O15259 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.43□□□□□ -2.48
NPHP1O15259 MIR101-1-201ENST00000362265 75 ntBASIC-0.44□□□□□ -2.48
NPHP1O15259 RNU6-795P-201ENST00000516323 103 ntBASIC-0.44□□□□□ -2.48
NPHP1O15259 SNORD114-28-201ENST00000363610 72 ntBASIC-0.45□□□□□ -2.48
NPHP1O15259 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.45□□□□□ -2.48
NPHP1O15259 RNU6-132P-201ENST00000383863 107 ntBASIC-0.45□□□□□ -2.48
NPHP1O15259 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.45□□□□□ -2.48
NPHP1O15259 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.45□□□□□ -2.48
NPHP1O15259 AC012531.4-201ENST00000616509 177 ntBASIC-0.45□□□□□ -2.48
NPHP1O15259 RNU6-54P-201ENST00000365563 107 ntBASIC-0.46□□□□□ -2.48
NPHP1O15259 RNU6-81P-201ENST00000365608 104 ntBASIC-0.46□□□□□ -2.48
NPHP1O15259 AC008267.6-201ENST00000441664 139 ntBASIC-0.46□□□□□ -2.48
NPHP1O15259 SNORD4B-201ENST00000459083 72 ntBASIC-0.46□□□□□ -2.48
NPHP1O15259 RNU6-904P-201ENST00000516206 101 ntBASIC-0.46□□□□□ -2.48
NPHP1O15259 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
NPHP1O15259 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
NPHP1O15259 AC108676.2-201ENST00000605225 163 ntBASIC-0.47□□□□□ -2.48
NPHP1O15259 RNA5SP275-201ENST00000363936 118 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 MIR548U-201ENST00000390728 81 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 SNORA19.1-201ENST00000410656 129 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.48□□□□□ -2.49
NPHP1O15259 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 FGF7P7-201ENST00000514120 227 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 SCARNA23-201ENST00000516060 130 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 RNU6-719P-201ENST00000516671 104 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 MIR3064-201ENST00000581130 66 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 AL590491.3-201ENST00000610731 82 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 MIR4788-201ENST00000639104 80 ntBASIC-0.48□□□□□ -2.49
NPHP1O15259 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
NPHP1O15259 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
NPHP1O15259 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
NPHP1O15259 RNU6-762P-201ENST00000517107 102 ntBASIC-0.49□□□□□ -2.49
NPHP1O15259 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 SNORD114-4-201ENST00000363962 75 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 MIR196A2-201ENST00000385189 110 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 RNU6-519P-201ENST00000410590 108 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 AC104996.3-201ENST00000590718 94 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 AL365222.1-201ENST00000614661 98 ntBASIC-0.5□□□□□ -2.49
NPHP1O15259 SNORA63.2-201ENST00000362603 126 ntBASIC-0.51□□□□□ -2.49
NPHP1O15259 RNU6-455P-201ENST00000384681 107 ntBASIC-0.51□□□□□ -2.49
NPHP1O15259 MIR548M-201ENST00000408260 86 ntBASIC-0.51□□□□□ -2.49
NPHP1O15259 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 324.3 ms