Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RNF223E7ERA6 RNA5SP484-201ENST00000458857 111 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 AC079804.2-201ENST00000490376 200 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 SNORA40.16-201ENST00000517238 121 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
RNF223E7ERA6 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 SNORA9.1-201ENST00000362412 131 ntBASIC1.84□□□□□ -2.11
RNF223E7ERA6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF223E7ERA6 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
RNF223E7ERA6 MIR548X-201ENST00000580069 75 ntBASIC1.84□□□□□ -2.11
RNF223E7ERA6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.84□□□□□ -2.11
RNF223E7ERA6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RNF223E7ERA6 RNA5SP393-201ENST00000363423 117 ntBASIC1.83□□□□□ -2.12
RNF223E7ERA6 SNORD116-16-201ENST00000384533 92 ntBASIC1.83□□□□□ -2.12
RNF223E7ERA6 RNU6-1246P-201ENST00000391064 107 ntBASIC1.83□□□□□ -2.12
RNF223E7ERA6 RNA5SP247-201ENST00000411181 105 ntBASIC1.83□□□□□ -2.12
RNF223E7ERA6 MIR7110-201ENST00000612638 86 ntBASIC1.83□□□□□ -2.12
RNF223E7ERA6 MIR6766-201ENST00000622641 72 ntBASIC1.83□□□□□ -2.12
RNF223E7ERA6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
RNF223E7ERA6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.82□□□□□ -2.12
RNF223E7ERA6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
RNF223E7ERA6 MIR21-201ENST00000362134 72 ntBASIC1.82□□□□□ -2.12
RNF223E7ERA6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.82□□□□□ -2.12
RNF223E7ERA6 Y_RNA.407-201ENST00000383986 113 ntBASIC1.82□□□□□ -2.12
RNF223E7ERA6 SNORD12-201ENST00000391002 90 ntBASIC1.82□□□□□ -2.12
RNF223E7ERA6 SNORA70.22-201ENST00000517160 124 ntBASIC1.82□□□□□ -2.12
RNF223E7ERA6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
RNF223E7ERA6 MIR652-201ENST00000385278 98 ntBASIC1.81□□□□□ -2.12
RNF223E7ERA6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RNF223E7ERA6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
RNF223E7ERA6 Y_RNA.74-201ENST00000362911 99 ntBASIC1.8□□□□□ -2.12
RNF223E7ERA6 AL021921.1-201ENST00000442774 93 ntBASIC1.8□□□□□ -2.12
RNF223E7ERA6 RNA5SP200-201ENST00000516360 103 ntBASIC1.8□□□□□ -2.12
RNF223E7ERA6 CYP3A54P-201ENST00000566950 75 ntBASIC1.8□□□□□ -2.12
RNF223E7ERA6 MIR4446-201ENST00000578505 67 ntBASIC1.8□□□□□ -2.12
RNF223E7ERA6 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RNF223E7ERA6 SCARNA16.5-201ENST00000517114 183 ntBASIC1.79□□□□□ -2.12
RNF223E7ERA6 AL162376.1-201ENST00000624117 175 ntBASIC1.79□□□□□ -2.12
RNF223E7ERA6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RNF223E7ERA6 MIR582-201ENST00000365731 98 ntBASIC1.78□□□□□ -2.12
RNF223E7ERA6 SNORA26.9-201ENST00000391322 122 ntBASIC1.78□□□□□ -2.12
RNF223E7ERA6 MIR548E-201ENST00000408287 88 ntBASIC1.78□□□□□ -2.12
RNF223E7ERA6 RNU1-92P-201ENST00000517017 135 ntBASIC1.78□□□□□ -2.12
RNF223E7ERA6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RNF223E7ERA6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RNF223E7ERA6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
RNF223E7ERA6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
RNF223E7ERA6 RNU1-17P-201ENST00000363022 152 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 SNORA40B-201ENST00000385573 128 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 MIR3678-201ENST00000578455 94 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
RNF223E7ERA6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RNF223E7ERA6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RNF223E7ERA6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RNF223E7ERA6 SNORD105-201ENST00000386910 85 ntBASIC1.76□□□□□ -2.13
RNF223E7ERA6 AC008834.1-201ENST00000511612 175 ntBASIC1.76□□□□□ -2.13
RNF223E7ERA6 FO624990.1-201ENST00000636373 85 ntBASIC1.76□□□□□ -2.13
RNF223E7ERA6 U6.96-201ENST00000636425 70 ntBASIC1.76□□□□□ -2.13
RNF223E7ERA6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
RNF223E7ERA6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.76□□□□□ -2.13
RNF223E7ERA6 RNU6-838P-201ENST00000363399 108 ntBASIC1.75□□□□□ -2.13
RNF223E7ERA6 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
RNF223E7ERA6 AC002429.1-201ENST00000437672 148 ntBASIC1.75□□□□□ -2.13
RNF223E7ERA6 RNU6-518P-201ENST00000516056 96 ntBASIC1.75□□□□□ -2.13
RNF223E7ERA6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
RNF223E7ERA6 Y_RNA.282-201ENST00000364793 102 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 MIR527-201ENST00000385244 85 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 SNORD89-201ENST00000390981 114 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 RNA5SP233-201ENST00000459153 113 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 U7.7-201ENST00000459276 60 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 MIR548AE1-201ENST00000583292 70 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
RNF223E7ERA6 MIR545-201ENST00000385085 106 ntBASIC1.73□□□□□ -2.13
RNF223E7ERA6 AL049779.4-201ENST00000604500 156 ntBASIC1.73□□□□□ -2.13
RNF223E7ERA6 RNU6-810P-201ENST00000364001 107 ntBASIC1.72□□□□□ -2.13
RNF223E7ERA6 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
RNF223E7ERA6 AL356379.1-201ENST00000414105 126 ntBASIC1.72□□□□□ -2.13
RNF223E7ERA6 MIR6828-201ENST00000636181 60 ntBASIC1.72□□□□□ -2.13
RNF223E7ERA6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
RNF223E7ERA6 MIR222-201ENST00000384992 110 ntBASIC1.71□□□□□ -2.14
RNF223E7ERA6 MIR516B1-201ENST00000385211 90 ntBASIC1.71□□□□□ -2.14
RNF223E7ERA6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.71□□□□□ -2.14
RNF223E7ERA6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.71□□□□□ -2.14
RNF223E7ERA6 MIR4473-201ENST00000583731 91 ntBASIC1.71□□□□□ -2.14
RNF223E7ERA6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.71□□□□□ -2.14
RNF223E7ERA6 HMGN2P38-201ENST00000423806 265 ntBASIC1.7□□□□□ -2.14
RNF223E7ERA6 AC006210.1-201ENST00000424882 111 ntBASIC1.7□□□□□ -2.14
RNF223E7ERA6 RNU6-246P-201ENST00000384702 107 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 MIR573-201ENST00000384964 99 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 AC108667.1-201ENST00000428618 249 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 FABP5P4-201ENST00000437203 171 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 MIR4498-201ENST00000577599 66 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 MIR3612-201ENST00000579753 87 ntBASIC1.69□□□□□ -2.14
RNF223E7ERA6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms