Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR8087-201ENST00000612745 78 ntBASIC1.16□□□□□ -2.22
TMEM88BA6NKF7 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.16□□□□□ -2.22
TMEM88BA6NKF7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
TMEM88BA6NKF7 RNA5SP173-201ENST00000364857 136 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 RNU6-1126P-201ENST00000384002 107 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 MIR617-201ENST00000385030 97 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 SNORD41.1-201ENST00000391000 69 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 U3.27-201ENST00000391237 200 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 SNORA25.13-201ENST00000516395 103 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 MIR3202-2-201ENST00000635980 79 ntBASIC1.15□□□□□ -2.23
TMEM88BA6NKF7 MIR140-201ENST00000385282 100 ntBASIC1.14□□□□□ -2.23
TMEM88BA6NKF7 MIR2113-201ENST00000459007 91 ntBASIC1.14□□□□□ -2.23
TMEM88BA6NKF7 RNU7-153P-201ENST00000516455 62 ntBASIC1.14□□□□□ -2.23
TMEM88BA6NKF7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TMEM88BA6NKF7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
TMEM88BA6NKF7 MIR451A-201ENST00000385059 72 ntBASIC1.13□□□□□ -2.23
TMEM88BA6NKF7 MIR6828-201ENST00000636181 60 ntBASIC1.13□□□□□ -2.23
TMEM88BA6NKF7 RNA5SP268-201ENST00000516828 124 ntBASIC1.12□□□□□ -2.23
TMEM88BA6NKF7 MIR4698-201ENST00000577795 80 ntBASIC1.12□□□□□ -2.23
TMEM88BA6NKF7 Y_RNA.219-201ENST00000364232 113 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 RNU6-726P-201ENST00000364680 107 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 RNU6-716P-201ENST00000365621 103 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 RNU6-380P-201ENST00000410207 107 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 PSMC1P5-201ENST00000512850 177 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 FGF7P7-201ENST00000514120 227 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 AC140658.3-201ENST00000567603 271 ntBASIC1.11□□□□□ -2.23
TMEM88BA6NKF7 Y_RNA.660-201ENST00000516002 120 ntBASIC1.1□□□□□ -2.23
TMEM88BA6NKF7 MIR330-201ENST00000362196 94 ntBASIC1.09□□□□□ -2.23
TMEM88BA6NKF7 SNORA63.2-201ENST00000362603 126 ntBASIC1.09□□□□□ -2.23
TMEM88BA6NKF7 RNU6-1051P-201ENST00000365471 102 ntBASIC1.09□□□□□ -2.23
TMEM88BA6NKF7 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
TMEM88BA6NKF7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.09□□□□□ -2.23
TMEM88BA6NKF7 AC092634.7-201ENST00000621022 103 ntBASIC1.09□□□□□ -2.23
TMEM88BA6NKF7 Y_RNA.264-201ENST00000364665 102 ntBASIC1.08□□□□□ -2.24
TMEM88BA6NKF7 SNORD71-201ENST00000411292 86 ntBASIC1.08□□□□□ -2.24
TMEM88BA6NKF7 Y_RNA.437-201ENST00000384113 113 ntBASIC1.07□□□□□ -2.24
TMEM88BA6NKF7 RNU6-35P-201ENST00000384530 107 ntBASIC1.06□□□□□ -2.24
TMEM88BA6NKF7 RNU6-592P-201ENST00000411333 103 ntBASIC1.06□□□□□ -2.24
TMEM88BA6NKF7 MIR4666B-201ENST00000578142 81 ntBASIC1.06□□□□□ -2.24
TMEM88BA6NKF7 AC073869.9-201ENST00000641610 120 ntBASIC1.06□□□□□ -2.24
TMEM88BA6NKF7 SNORA8.2-201ENST00000384372 139 ntBASIC1.05□□□□□ -2.24
TMEM88BA6NKF7 RNU6-129P-201ENST00000391022 107 ntBASIC1.05□□□□□ -2.24
TMEM88BA6NKF7 AL450471.1-201ENST00000447509 127 ntBASIC1.05□□□□□ -2.24
TMEM88BA6NKF7 RNU6-573P-201ENST00000383938 106 ntBASIC1.04□□□□□ -2.24
TMEM88BA6NKF7 SNORD77.2-201ENST00000391045 68 ntBASIC1.04□□□□□ -2.24
TMEM88BA6NKF7 MIR1197-201ENST00000408818 88 ntBASIC1.04□□□□□ -2.24
TMEM88BA6NKF7 RNU6-624P-201ENST00000363411 107 ntBASIC1.03□□□□□ -2.24
TMEM88BA6NKF7 SNORA36.1-201ENST00000363424 132 ntBASIC1.03□□□□□ -2.24
TMEM88BA6NKF7 MIR519E-201ENST00000385075 84 ntBASIC1.03□□□□□ -2.24
TMEM88BA6NKF7 RNA5SP193-201ENST00000410353 107 ntBASIC1.03□□□□□ -2.24
TMEM88BA6NKF7 SNORA40.8-201ENST00000411034 126 ntBASIC1.02□□□□□ -2.25
TMEM88BA6NKF7 RNU6-557P-201ENST00000516842 110 ntBASIC1.02□□□□□ -2.25
TMEM88BA6NKF7 MIR548AG2-201ENST00000581228 64 ntBASIC1.02□□□□□ -2.25
TMEM88BA6NKF7 MIR4653-201ENST00000585107 83 ntBASIC1.02□□□□□ -2.25
TMEM88BA6NKF7 RNU6-208P-201ENST00000362431 107 ntBASIC1.01□□□□□ -2.25
TMEM88BA6NKF7 MIR4711-201ENST00000578274 70 ntBASIC1.01□□□□□ -2.25
TMEM88BA6NKF7 AL162376.1-201ENST00000624117 175 ntBASIC1.01□□□□□ -2.25
TMEM88BA6NKF7 Y_RNA.316-201ENST00000365118 111 ntBASIC1□□□□□ -2.25
TMEM88BA6NKF7 RNU6-652P-201ENST00000365488 107 ntBASIC1□□□□□ -2.25
TMEM88BA6NKF7 MIR1245B-201ENST00000636115 69 ntBASIC1□□□□□ -2.25
TMEM88BA6NKF7 RNU6-315P-201ENST00000362666 107 ntBASIC0.99□□□□□ -2.25
TMEM88BA6NKF7 RNA5SP517-201ENST00000364724 117 ntBASIC0.99□□□□□ -2.25
TMEM88BA6NKF7 SNORD78.1-201ENST00000390866 65 ntBASIC0.99□□□□□ -2.25
TMEM88BA6NKF7 MIR4460-201ENST00000577862 86 ntBASIC0.99□□□□□ -2.25
TMEM88BA6NKF7 MIR7107-201ENST00000611489 80 ntBASIC0.99□□□□□ -2.25
TMEM88BA6NKF7 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
TMEM88BA6NKF7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
TMEM88BA6NKF7 RNU6-1124P-201ENST00000384169 107 ntBASIC0.98□□□□□ -2.25
TMEM88BA6NKF7 RNU6-269P-201ENST00000391077 97 ntBASIC0.98□□□□□ -2.25
TMEM88BA6NKF7 RNU6-1052P-201ENST00000411398 104 ntBASIC0.98□□□□□ -2.25
TMEM88BA6NKF7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.98□□□□□ -2.25
TMEM88BA6NKF7 RNU6-719P-201ENST00000516671 104 ntBASIC0.98□□□□□ -2.25
TMEM88BA6NKF7 RNU6-686P-201ENST00000364839 107 ntBASIC0.97□□□□□ -2.25
TMEM88BA6NKF7 RNY1P8-201ENST00000383970 114 ntBASIC0.97□□□□□ -2.25
TMEM88BA6NKF7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TMEM88BA6NKF7 RNU6-681P-201ENST00000364012 104 ntBASIC0.96□□□□□ -2.26
TMEM88BA6NKF7 MIR508-201ENST00000384857 115 ntBASIC0.96□□□□□ -2.26
TMEM88BA6NKF7 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
TMEM88BA6NKF7 AC097510.1-201ENST00000510945 133 ntBASIC0.96□□□□□ -2.26
TMEM88BA6NKF7 RNU6-161P-201ENST00000363051 106 ntBASIC0.95□□□□□ -2.26
TMEM88BA6NKF7 RNU1-141P-201ENST00000364623 158 ntBASIC0.95□□□□□ -2.26
TMEM88BA6NKF7 RNU2-59P-201ENST00000410482 191 ntBASIC0.95□□□□□ -2.26
TMEM88BA6NKF7 RNU6-1108P-201ENST00000516308 104 ntBASIC0.95□□□□□ -2.26
TMEM88BA6NKF7 MIR3140-201ENST00000583685 90 ntBASIC0.95□□□□□ -2.26
TMEM88BA6NKF7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
TMEM88BA6NKF7 RNU6-1094P-201ENST00000362416 104 ntBASIC0.94□□□□□ -2.26
TMEM88BA6NKF7 RNU6-1177P-201ENST00000391058 104 ntBASIC0.94□□□□□ -2.26
TMEM88BA6NKF7 AC018659.1-201ENST00000551083 169 ntBASIC0.94□□□□□ -2.26
TMEM88BA6NKF7 MIR6086-201ENST00000638065 55 ntBASIC0.94□□□□□ -2.26
TMEM88BA6NKF7 RNA5SP347-201ENST00000362445 119 ntBASIC0.93□□□□□ -2.26
TMEM88BA6NKF7 SNORD118-201ENST00000363593 134 ntBASIC0.93□□□□□ -2.26
TMEM88BA6NKF7 MIR518A1-201ENST00000385068 85 ntBASIC0.93□□□□□ -2.26
TMEM88BA6NKF7 Y_RNA.685-201ENST00000516532 108 ntBASIC0.93□□□□□ -2.26
TMEM88BA6NKF7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.93□□□□□ -2.26
TMEM88BA6NKF7 MIR548O2-201ENST00000616090 70 ntBASIC0.93□□□□□ -2.26
TMEM88BA6NKF7 AC006210.1-201ENST00000424882 111 ntBASIC0.92□□□□□ -2.26
TMEM88BA6NKF7 SNORA25.18-201ENST00000607153 114 ntBASIC0.92□□□□□ -2.26
TMEM88BA6NKF7 U7.6-201ENST00000610841 64 ntBASIC0.92□□□□□ -2.26
TMEM88BA6NKF7 MT-TY-201ENST00000387409 66 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 260.6 ms