Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SNORD18B-201ENST00000365659 72 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 RNU6-24P-201ENST00000384440 107 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 MIR548G-201ENST00000408442 89 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 RNU6-935P-201ENST00000410371 100 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 MTND2P23-201ENST00000422990 651 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 MTCYBP6-201ENST00000441810 138 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 RNU6-635P-201ENST00000516651 102 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 MIR3163-201ENST00000581592 73 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 MIR4306-201ENST00000583390 91 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 MIR6738-201ENST00000619620 64 ntBASIC-0.95□□□□□ -2.56
USH1CQ9Y6N9 SNORD38.1-201ENST00000363863 68 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 RNU6-312P-201ENST00000364629 107 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 MIR548H3-201ENST00000408771 118 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 RNU2-38P-201ENST00000410856 79 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 RNU6-90P-201ENST00000606352 106 ntBASIC-0.96□□□□□ -2.56
USH1CQ9Y6N9 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 RNU6-466P-201ENST00000391224 103 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 MIR548F4-201ENST00000408515 105 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 SNORD42B-201ENST00000458893 67 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 RNU7-121P-201ENST00000516604 62 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 MIR4464-201ENST00000580818 92 ntBASIC-0.97□□□□□ -2.56
USH1CQ9Y6N9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 RNU6-639P-201ENST00000384074 107 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 U3.27-201ENST00000391237 200 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 SNORD127-201ENST00000458892 86 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 MTATP8P1-201ENST00000467115 207 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 MIR3115-201ENST00000577915 68 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 MIR4801-201ENST00000582704 82 ntBASIC-0.98□□□□□ -2.57
USH1CQ9Y6N9 SNORD114-4-201ENST00000363962 75 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 MIRLET7B-201ENST00000385140 83 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 RNU6-75P-201ENST00000515944 104 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 AC068339.1-201ENST00000526965 141 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 MIR6773-201ENST00000612812 74 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 AC021753.1-201ENST00000635724 168 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 MIR3658-201ENST00000636291 56 ntBASIC-0.99□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.20-201ENST00000362479 113 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 RNU6-363P-201ENST00000362895 105 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 RNU6-238P-201ENST00000363313 106 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 MIR451A-201ENST00000385059 72 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 MIR8485-201ENST00000401372 91 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 SNORA7.5-201ENST00000410672 110 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 AC026421.1-201ENST00000519101 163 ntBASIC-1□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.01□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.01□□□□□ -2.57
USH1CQ9Y6N9 RNU6-239P-201ENST00000390990 99 ntBASIC-1.01□□□□□ -2.57
USH1CQ9Y6N9 MIR3121-201ENST00000579680 77 ntBASIC-1.01□□□□□ -2.57
USH1CQ9Y6N9 AL512310.12-203ENST00000640543 90 ntBASIC-1.01□□□□□ -2.57
USH1CQ9Y6N9 RNU6-10P-201ENST00000384036 107 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 MIR124-2-201ENST00000385081 109 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 RNU2-51P-201ENST00000410708 197 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 SNORD18.2-201ENST00000459604 70 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 RNU6-479P-201ENST00000516348 105 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 AC090617.8-201ENST00000623339 167 ntBASIC-1.02□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.03□□□□□ -2.57
USH1CQ9Y6N9 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.03□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.03□□□□□ -2.57
USH1CQ9Y6N9 MIR548D2-201ENST00000384955 97 ntBASIC-1.03□□□□□ -2.57
USH1CQ9Y6N9 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.03□□□□□ -2.57
USH1CQ9Y6N9 RNU7-197P-201ENST00000458836 62 ntBASIC-1.04□□□□□ -2.58
USH1CQ9Y6N9 AC130289.1-201ENST00000577321 73 ntBASIC-1.04□□□□□ -2.58
USH1CQ9Y6N9 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.04□□□□□ -2.58
USH1CQ9Y6N9 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.04□□□□□ -2.58
USH1CQ9Y6N9 MIR6888-201ENST00000621977 67 ntBASIC-1.04□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 RNU6-746P-201ENST00000384112 109 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 MIR587-201ENST00000384845 96 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 MIR759-201ENST00000390224 91 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 RNU4-71P-201ENST00000516258 113 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.05□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 SNORA63.6-201ENST00000364921 119 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 AL442128.1-201ENST00000615151 90 ntBASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.06□□□□□ -2.58
USH1CQ9Y6N9 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 RNU6-647P-201ENST00000364243 107 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 RNU6-409P-201ENST00000384114 104 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 SNORD37.2-201ENST00000391075 66 ntBASIC-1.07□□□□□ -2.58
USH1CQ9Y6N9 RNA5SP136-201ENST00000410906 107 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 255 ms