Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU7-119P-201ENST00000459279 63 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 RNU7-13P-201ENST00000516413 62 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 MIR4448-201ENST00000584360 86 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 AL645939.4-201ENST00000604495 135 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 RNU6-698P-201ENST00000363523 107 ntBASIC2.41□□□□□ -2.02
PDZRN3Q9UPQ7 RNU6-34P-201ENST00000364874 107 ntBASIC2.41□□□□□ -2.02
PDZRN3Q9UPQ7 RNU6-535P-201ENST00000384722 107 ntBASIC2.41□□□□□ -2.02
PDZRN3Q9UPQ7 RNU6-321P-201ENST00000410912 106 ntBASIC2.41□□□□□ -2.02
PDZRN3Q9UPQ7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDZRN3Q9UPQ7 RNA5SP190-201ENST00000365222 118 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 RNU4-52P-201ENST00000384209 138 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 MIR548C-201ENST00000384815 97 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 MIR513A1-201ENST00000385138 129 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 RNA5SP489-201ENST00000410986 109 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 RNU7-174P-201ENST00000516248 59 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 SNORA25.15-201ENST00000516487 89 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 RNA5SP364-201ENST00000516938 78 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 AC008608.1-201ENST00000603910 127 ntBASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-1250P-201ENST00000391218 107 ntBASIC2.39□□□□□ -2.03
PDZRN3Q9UPQ7 SNORD83.1-201ENST00000411362 77 ntBASIC2.39□□□□□ -2.03
PDZRN3Q9UPQ7 AL133373.1-201ENST00000497098 94 ntBASIC2.39□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6ATAC14P-201ENST00000516218 91 ntBASIC2.39□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-231P-201ENST00000517122 103 ntBASIC2.39□□□□□ -2.03
PDZRN3Q9UPQ7 MIR103A2-201ENST00000362154 78 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 RNA5SP264-201ENST00000363115 107 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 SNORA41B-201ENST00000384785 128 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 MIR517B-201ENST00000385102 67 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 MIR125B2-201ENST00000385128 89 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 RNA5SP212-201ENST00000391223 107 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-250P-201ENST00000516958 103 ntBASIC2.38□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-838P-201ENST00000363399 108 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 Y_RNA.330-201ENST00000365230 109 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 MIR617-201ENST00000385030 97 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 MIR676-201ENST00000390702 67 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 HMGN2P19-201ENST00000425149 265 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 SNORA40.16-201ENST00000517238 121 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 MIR4299-201ENST00000577899 72 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 AL359821.1-201ENST00000605519 182 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 U2.7-201ENST00000619197 100 ntBASIC2.37□□□□□ -2.03
PDZRN3Q9UPQ7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-724P-201ENST00000390958 105 ntBASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 AC067940.1-201ENST00000458411 300 ntBASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 MIR548X-201ENST00000580069 75 ntBASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 MIR7111-201ENST00000619751 72 ntBASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.36□□□□□ -2.03
PDZRN3Q9UPQ7 RNA5SP403-201ENST00000363598 108 ntBASIC2.35□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6V-201ENST00000384105 107 ntBASIC2.35□□□□□ -2.03
PDZRN3Q9UPQ7 MIR521-2-201ENST00000384818 87 ntBASIC2.35□□□□□ -2.03
PDZRN3Q9UPQ7 SNORD13-201ENST00000459299 104 ntBASIC2.35□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-947P-201ENST00000516264 106 ntBASIC2.35□□□□□ -2.03
PDZRN3Q9UPQ7 AL773524.1-201ENST00000614065 229 ntBASIC2.35□□□□□ -2.03
PDZRN3Q9UPQ7 RNA5SP276-201ENST00000362580 94 ntBASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 RNU6-1162P-201ENST00000384443 104 ntBASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 MIR519E-201ENST00000385075 84 ntBASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 AP1B1P2-201ENST00000416196 106 ntBASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 AC084768.2-201ENST00000622736 221 ntBASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.34□□□□□ -2.03
PDZRN3Q9UPQ7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDZRN3Q9UPQ7 MIR499A-201ENST00000384903 122 ntBASIC2.33□□□□□ -2.04
PDZRN3Q9UPQ7 AC018659.1-201ENST00000551083 169 ntBASIC2.33□□□□□ -2.04
PDZRN3Q9UPQ7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 Y_RNA.250-201ENST00000364542 110 ntBASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 MIR9-3-201ENST00000385084 90 ntBASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 RNU6-994P-201ENST00000410507 111 ntBASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 AC021146.9-201ENST00000512503 156 ntBASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 uc_338.20-201ENST00000621563 178 ntBASIC2.32□□□□□ -2.04
PDZRN3Q9UPQ7 SNORA16.1-201ENST00000364597 132 ntBASIC2.31□□□□□ -2.04
PDZRN3Q9UPQ7 RNU6-934P-201ENST00000365154 107 ntBASIC2.31□□□□□ -2.04
PDZRN3Q9UPQ7 AC003989.2-201ENST00000440224 169 ntBASIC2.31□□□□□ -2.04
PDZRN3Q9UPQ7 TRMT112P2-201ENST00000512910 132 ntBASIC2.31□□□□□ -2.04
PDZRN3Q9UPQ7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.31□□□□□ -2.04
PDZRN3Q9UPQ7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PDZRN3Q9UPQ7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PDZRN3Q9UPQ7 RNU7-161P-201ENST00000517289 62 ntBASIC2.3□□□□□ -2.04
PDZRN3Q9UPQ7 MIR4771-2-201ENST00000577758 74 ntBASIC2.3□□□□□ -2.04
PDZRN3Q9UPQ7 MIR4771-1-201ENST00000582617 74 ntBASIC2.3□□□□□ -2.04
PDZRN3Q9UPQ7 MIR8070-201ENST00000616510 88 ntBASIC2.3□□□□□ -2.04
PDZRN3Q9UPQ7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDZRN3Q9UPQ7 Y_RNA.325-201ENST00000365171 122 ntBASIC2.29□□□□□ -2.04
PDZRN3Q9UPQ7 SNORD116.2-201ENST00000391251 93 ntBASIC2.29□□□□□ -2.04
PDZRN3Q9UPQ7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 SNORD115-24-201ENST00000363528 82 ntBASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 SNORD48-201ENST00000364953 64 ntBASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 RNU4-62P-201ENST00000410125 130 ntBASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 snoU13.13-201ENST00000458842 104 ntBASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 MIR4419B-201ENST00000577260 68 ntBASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 MIR502-201ENST00000606349 86 ntBASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDZRN3Q9UPQ7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
PDZRN3Q9UPQ7 JTBP1-201ENST00000441314 247 ntBASIC2.27□□□□□ -2.05
PDZRN3Q9UPQ7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms