Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNA5SP276-201ENST00000362580 94 ntBASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 RNU6-838P-201ENST00000363399 108 ntBASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 AC023827.1-201ENST00000569247 97 ntBASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 AC104984.5-201ENST00000586878 94 ntBASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM35Q9UPQ4 Y_RNA.325-201ENST00000365171 122 ntBASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 SNORD41.1-201ENST00000391000 69 ntBASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 RNA5SP338-201ENST00000410495 85 ntBASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 SNORA31.2-201ENST00000516019 134 ntBASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM35Q9UPQ4 SNORA33.1-201ENST00000364957 130 ntBASIC2.59□□□□□ -1.99
TRIM35Q9UPQ4 RNU1-52P-201ENST00000384190 164 ntBASIC2.59□□□□□ -1.99
TRIM35Q9UPQ4 Y_RNA.633-201ENST00000459107 95 ntBASIC2.59□□□□□ -1.99
TRIM35Q9UPQ4 AC019176.1-201ENST00000518519 225 ntBASIC2.59□□□□□ -1.99
TRIM35Q9UPQ4 AP000553.5-201ENST00000641933 54 ntBASIC2.59□□□□□ -1.99
TRIM35Q9UPQ4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM35Q9UPQ4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
TRIM35Q9UPQ4 MIR302D-201ENST00000362275 68 ntBASIC2.58□□□□□ -2
TRIM35Q9UPQ4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.58□□□□□ -2
TRIM35Q9UPQ4 MIR1289-2-201ENST00000408360 111 ntBASIC2.58□□□□□ -2
TRIM35Q9UPQ4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.58□□□□□ -2
TRIM35Q9UPQ4 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
TRIM35Q9UPQ4 MIR7110-201ENST00000612638 86 ntBASIC2.58□□□□□ -2
TRIM35Q9UPQ4 MIR144-201ENST00000384886 86 ntBASIC2.57□□□□□ -2
TRIM35Q9UPQ4 RNU6-994P-201ENST00000410507 111 ntBASIC2.57□□□□□ -2
TRIM35Q9UPQ4 RNU6-717P-201ENST00000459076 104 ntBASIC2.57□□□□□ -2
TRIM35Q9UPQ4 AC048334.1-201ENST00000477975 159 ntBASIC2.57□□□□□ -2
TRIM35Q9UPQ4 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
TRIM35Q9UPQ4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM35Q9UPQ4 RNU6-1065P-201ENST00000384513 106 ntBASIC2.56□□□□□ -2
TRIM35Q9UPQ4 AC079140.2-201ENST00000506193 142 ntBASIC2.56□□□□□ -2
TRIM35Q9UPQ4 AL136317.1-201ENST00000612653 226 ntBASIC2.56□□□□□ -2
TRIM35Q9UPQ4 AL773524.1-201ENST00000614065 229 ntBASIC2.56□□□□□ -2
TRIM35Q9UPQ4 MIR6715A-201ENST00000615929 79 ntBASIC2.56□□□□□ -2
TRIM35Q9UPQ4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.55□□□□□ -2
TRIM35Q9UPQ4 SNORD1A-201ENST00000364968 72 ntBASIC2.55□□□□□ -2
TRIM35Q9UPQ4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM35Q9UPQ4 MIR100-201ENST00000385259 80 ntBASIC2.55□□□□□ -2
TRIM35Q9UPQ4 snoU13.26-201ENST00000459452 105 ntBASIC2.55□□□□□ -2
TRIM35Q9UPQ4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.55□□□□□ -2
TRIM35Q9UPQ4 RNA5SP432-201ENST00000362480 116 ntBASIC2.54□□□□□ -2
TRIM35Q9UPQ4 SNORD33-201ENST00000362761 85 ntBASIC2.54□□□□□ -2
TRIM35Q9UPQ4 RNU1-141P-201ENST00000364623 158 ntBASIC2.54□□□□□ -2
TRIM35Q9UPQ4 SNORA9.1-201ENST00000362412 131 ntBASIC2.53□□□□□ -2
TRIM35Q9UPQ4 SNORD116-16-201ENST00000384533 92 ntBASIC2.53□□□□□ -2
TRIM35Q9UPQ4 MIR520F-201ENST00000384824 87 ntBASIC2.53□□□□□ -2
TRIM35Q9UPQ4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.53□□□□□ -2
TRIM35Q9UPQ4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 SNORA40B-201ENST00000385573 128 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 MIR758-201ENST00000390227 88 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 RNU6-1246P-201ENST00000391064 107 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 AC003989.2-201ENST00000440224 169 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 snoU13.9-201ENST00000458927 103 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 RNU5B-6P-201ENST00000516765 68 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 RNU6-135P-201ENST00000516769 101 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 MIR3937-201ENST00000580135 106 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 MIR4713-201ENST00000582691 75 ntBASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM35Q9UPQ4 MIR1-1-201ENST00000362147 71 ntBASIC2.51□□□□□ -2.01
TRIM35Q9UPQ4 SNORA25.8-201ENST00000364831 128 ntBASIC2.51□□□□□ -2.01
TRIM35Q9UPQ4 AL591704.2-201ENST00000421658 181 ntBASIC2.51□□□□□ -2.01
TRIM35Q9UPQ4 HMGN2P23-201ENST00000456759 269 ntBASIC2.51□□□□□ -2.01
TRIM35Q9UPQ4 MIR4639-201ENST00000584938 69 ntBASIC2.51□□□□□ -2.01
TRIM35Q9UPQ4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.51□□□□□ -2.01
TRIM35Q9UPQ4 SNORA7.1-201ENST00000363750 139 ntBASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 Y_RNA.363-201ENST00000365529 113 ntBASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 MIR548L-201ENST00000408303 86 ntBASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 RNU6-548P-201ENST00000517083 115 ntBASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 AL512310.8-201ENST00000550183 120 ntBASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM35Q9UPQ4 SNORA63.6-201ENST00000364921 119 ntBASIC2.49□□□□□ -2.01
TRIM35Q9UPQ4 RNU7-21P-201ENST00000459430 62 ntBASIC2.49□□□□□ -2.01
TRIM35Q9UPQ4 AC244669.1-204ENST00000621564 178 ntBASIC2.49□□□□□ -2.01
TRIM35Q9UPQ4 Y_RNA.224-201ENST00000364308 111 ntBASIC2.48□□□□□ -2.01
TRIM35Q9UPQ4 RNU1-40P-201ENST00000516816 164 ntBASIC2.48□□□□□ -2.01
TRIM35Q9UPQ4 RNU1-97P-201ENST00000516872 164 ntBASIC2.48□□□□□ -2.01
TRIM35Q9UPQ4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM35Q9UPQ4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM35Q9UPQ4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 RNA5SP37-201ENST00000365420 130 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 SNORD28-201ENST00000384706 75 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 MIR9-3-201ENST00000385084 90 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 MIR517C-201ENST00000385103 95 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 MIR644A-201ENST00000385262 94 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 RNU6-1250P-201ENST00000391218 107 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 MIR6845-201ENST00000613182 61 ntBASIC2.47□□□□□ -2.01
TRIM35Q9UPQ4 RNU6-247P-201ENST00000362636 107 ntBASIC2.46□□□□□ -2.02
TRIM35Q9UPQ4 Y_RNA.74-201ENST00000362911 99 ntBASIC2.46□□□□□ -2.02
TRIM35Q9UPQ4 SNORD23.1-201ENST00000408212 104 ntBASIC2.46□□□□□ -2.02
TRIM35Q9UPQ4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC2.46□□□□□ -2.02
TRIM35Q9UPQ4 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
TRIM35Q9UPQ4 RNU6-810P-201ENST00000364001 107 ntBASIC2.45□□□□□ -2.02
TRIM35Q9UPQ4 RNU6-726P-201ENST00000364680 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms