Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SNORA75-201ENST00000384158 137 ntBASIC-5.27□□□□□ -3.25
SMCO4Q9NRQ5 Y_RNA.615-201ENST00000410769 117 ntBASIC-5.27□□□□□ -3.25
SMCO4Q9NRQ5 RNU6-240P-201ENST00000516098 97 ntBASIC-5.27□□□□□ -3.25
SMCO4Q9NRQ5 Y_RNA.79-201ENST00000362992 113 ntBASIC-5.28□□□□□ -3.25
SMCO4Q9NRQ5 SNORD38.1-201ENST00000363863 68 ntBASIC-5.28□□□□□ -3.25
SMCO4Q9NRQ5 SNORD116-25-201ENST00000516517 92 ntBASIC-5.28□□□□□ -3.25
SMCO4Q9NRQ5 MIR3646-201ENST00000578301 84 ntBASIC-5.28□□□□□ -3.25
SMCO4Q9NRQ5 MIR3662-201ENST00000637030 95 ntBASIC-5.28□□□□□ -3.25
SMCO4Q9NRQ5 MIR4773-1-201ENST00000637203 78 ntBASIC-5.28□□□□□ -3.25
SMCO4Q9NRQ5 Y_RNA.143-201ENST00000363520 106 ntBASIC-5.29□□□□□ -3.26
SMCO4Q9NRQ5 SNORD63-201ENST00000384262 68 ntBASIC-5.29□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.526-201ENST00000384572 110 ntBASIC-5.29□□□□□ -3.26
SMCO4Q9NRQ5 MTCO2P4-201ENST00000517968 247 ntBASIC-5.29□□□□□ -3.26
SMCO4Q9NRQ5 U2.7-201ENST00000619197 100 ntBASIC-5.29□□□□□ -3.26
SMCO4Q9NRQ5 RNU6-1277P-201ENST00000364561 107 ntBASIC-5.3□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.109-201ENST00000363215 102 ntBASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.144-201ENST00000363521 113 ntBASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 RNU6-1051P-201ENST00000365471 102 ntBASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.594-201ENST00000410373 140 ntBASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 AL691482.2-201ENST00000457453 84 ntBASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 AC005899.2-201ENST00000584353 90 ntBASIC-5.31□□□□□ -3.26
SMCO4Q9NRQ5 RNU6-247P-201ENST00000362636 107 ntBASIC-5.32□□□□□ -3.26
SMCO4Q9NRQ5 AL731563.1-201ENST00000442202 214 ntBASIC-5.32□□□□□ -3.26
SMCO4Q9NRQ5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-5.32□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.772-201ENST00000606692 102 ntBASIC-5.32□□□□□ -3.26
SMCO4Q9NRQ5 AC073114.1-201ENST00000612027 490 ntBASIC-5.32□□□□□ -3.26
SMCO4Q9NRQ5 SNORA27.2-201ENST00000363365 126 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 RNY1P1-201ENST00000364372 112 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.639-201ENST00000458981 102 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 RNA5SP236-201ENST00000516169 116 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 RNU6-835P-201ENST00000516974 104 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 AL365265.1-201ENST00000621045 234 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 U2.18-201ENST00000622185 84 ntBASIC-5.33□□□□□ -3.26
SMCO4Q9NRQ5 Y_RNA.511-201ENST00000384514 103 ntBASIC-5.34□□□□□ -3.26
SMCO4Q9NRQ5 MIR513C-201ENST00000401352 84 ntBASIC-5.34□□□□□ -3.26
SMCO4Q9NRQ5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-5.34□□□□□ -3.26
SMCO4Q9NRQ5 RNU6-976P-201ENST00000516086 111 ntBASIC-5.34□□□□□ -3.26
SMCO4Q9NRQ5 RNU6-971P-201ENST00000516920 106 ntBASIC-5.34□□□□□ -3.26
SMCO4Q9NRQ5 MIR429-201ENST00000362106 83 ntBASIC-5.35□□□□□ -3.27
SMCO4Q9NRQ5 MIR548U-201ENST00000390728 81 ntBASIC-5.35□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-1050P-201ENST00000410388 107 ntBASIC-5.35□□□□□ -3.27
SMCO4Q9NRQ5 MTND3P2-201ENST00000438452 342 ntBASIC-5.35□□□□□ -3.27
SMCO4Q9NRQ5 AC092794.1-201ENST00000612734 582 ntBASIC-5.35□□□□□ -3.27
SMCO4Q9NRQ5 Y_RNA.152-201ENST00000363578 100 ntBASIC-5.36□□□□□ -3.27
SMCO4Q9NRQ5 Y_RNA.286-201ENST00000364813 102 ntBASIC-5.36□□□□□ -3.27
SMCO4Q9NRQ5 MIR628-201ENST00000385229 95 ntBASIC-5.36□□□□□ -3.27
SMCO4Q9NRQ5 RNU7-4P-201ENST00000516961 62 ntBASIC-5.36□□□□□ -3.27
SMCO4Q9NRQ5 Y_RNA.813-201ENST00000364639 102 ntBASIC-5.37□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-1324P-201ENST00000384222 107 ntBASIC-5.37□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-1215P-201ENST00000384441 102 ntBASIC-5.37□□□□□ -3.27
SMCO4Q9NRQ5 MIR581-201ENST00000384895 96 ntBASIC-5.37□□□□□ -3.27
SMCO4Q9NRQ5 RNY3P8-201ENST00000411366 126 ntBASIC-5.37□□□□□ -3.27
SMCO4Q9NRQ5 AL731768.1-201ENST00000603124 139 ntBASIC-5.37□□□□□ -3.27
SMCO4Q9NRQ5 Y_RNA.74-201ENST00000362911 99 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-987P-201ENST00000384759 104 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 MIR509-1-201ENST00000385265 94 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 MIR509-2-201ENST00000390724 91 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 RNU7-169P-201ENST00000459456 61 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-307P-201ENST00000516743 106 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-273P-201ENST00000516937 96 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 SNORD113-5-201ENST00000607261 78 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 AC068137.3-201ENST00000639191 341 ntBASIC-5.38□□□□□ -3.27
SMCO4Q9NRQ5 SNORD113-6-201ENST00000363345 75 ntBASIC-5.39□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-828P-201ENST00000364876 107 ntBASIC-5.39□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-1016P-201ENST00000516689 94 ntBASIC-5.39□□□□□ -3.27
SMCO4Q9NRQ5 U6.106-201ENST00000636360 105 ntBASIC-5.39□□□□□ -3.27
SMCO4Q9NRQ5 MIRLET7A3-201ENST00000362116 74 ntBASIC-5.4□□□□□ -3.27
SMCO4Q9NRQ5 Y_RNA.282-201ENST00000364793 102 ntBASIC-5.4□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-937P-201ENST00000384325 106 ntBASIC-5.4□□□□□ -3.27
SMCO4Q9NRQ5 RNU6-911P-201ENST00000516523 104 ntBASIC-5.4□□□□□ -3.27
SMCO4Q9NRQ5 U2.1-201ENST00000618978 145 ntBASIC-5.4□□□□□ -3.27
SMCO4Q9NRQ5 AL512310.12-203ENST00000640543 90 ntBASIC-5.4□□□□□ -3.27
SMCO4Q9NRQ5 UBE2WP1-201ENST00000362030 340 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-834P-201ENST00000362367 110 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-643P-201ENST00000384018 107 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 MIR616-201ENST00000385293 97 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 MIR548A3-201ENST00000385297 97 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 Y_RNA.605-201ENST00000410577 105 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 RNU7-85P-201ENST00000458851 63 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 MIR3064-201ENST00000581130 66 ntBASIC-5.41□□□□□ -3.28
SMCO4Q9NRQ5 MIR548AA1-201ENST00000384971 97 ntBASIC-5.42□□□□□ -3.28
SMCO4Q9NRQ5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-5.42□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-1313P-201ENST00000362622 102 ntBASIC-5.43□□□□□ -3.28
SMCO4Q9NRQ5 RNU4-43P-201ENST00000410628 137 ntBASIC-5.43□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-1068P-201ENST00000410958 103 ntBASIC-5.43□□□□□ -3.28
SMCO4Q9NRQ5 Y_RNA.773-201ENST00000607168 90 ntBASIC-5.43□□□□□ -3.28
SMCO4Q9NRQ5 MIR1321-201ENST00000637766 79 ntBASIC-5.43□□□□□ -3.28
SMCO4Q9NRQ5 Y_RNA.266-201ENST00000364678 96 ntBASIC-5.44□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-453P-201ENST00000516819 85 ntBASIC-5.44□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-561P-201ENST00000516222 102 ntBASIC-5.45□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-566P-201ENST00000516790 107 ntBASIC-5.45□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-340P-201ENST00000364005 107 ntBASIC-5.46□□□□□ -3.28
SMCO4Q9NRQ5 SNORD50.2-201ENST00000365465 70 ntBASIC-5.46□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-656P-201ENST00000516785 107 ntBASIC-5.46□□□□□ -3.28
SMCO4Q9NRQ5 RNU6-1088P-201ENST00000516850 104 ntBASIC-5.46□□□□□ -3.28
SMCO4Q9NRQ5 AC104996.3-201ENST00000590718 94 ntBASIC-5.47□□□□□ -3.29
SMCO4Q9NRQ5 Y_RNA.296-201ENST00000364930 108 ntBASIC-5.48□□□□□ -3.29
SMCO4Q9NRQ5 SNORD90-201ENST00000391145 111 ntBASIC-5.48□□□□□ -3.29
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms