Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SNORD113.3-201ENST00000364630 78 ntBASIC1.37□□□□□ -2.19
VPS11Q9H270 RNU6-604P-201ENST00000390917 100 ntBASIC1.37□□□□□ -2.19
VPS11Q9H270 SNORA17.3-201ENST00000391159 129 ntBASIC1.37□□□□□ -2.19
VPS11Q9H270 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS11Q9H270 AC138907.6-201ENST00000568401 126 ntBASIC1.37□□□□□ -2.19
VPS11Q9H270 AC138869.1-201ENST00000568623 124 ntBASIC1.37□□□□□ -2.19
VPS11Q9H270 AL109933.3-201ENST00000619095 188 ntBASIC1.37□□□□□ -2.19
VPS11Q9H270 SNORA25.4-201ENST00000363666 124 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 RNU6-681P-201ENST00000364012 104 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 AC108667.1-201ENST00000428618 249 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 RNU6-287P-201ENST00000516230 98 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 AC008608.1-201ENST00000603910 127 ntBASIC1.36□□□□□ -2.19
VPS11Q9H270 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
VPS11Q9H270 SNORD113.1-201ENST00000363280 73 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 RNU6-382P-201ENST00000365181 106 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 RNU6-535P-201ENST00000384722 107 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 RNU6-1177P-201ENST00000391058 104 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 AC244505.6-201ENST00000452829 130 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 MIR548AG2-201ENST00000581228 64 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS11Q9H270 MIR4676-201ENST00000583078 72 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
VPS11Q9H270 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS11Q9H270 RNU6-895P-201ENST00000384125 103 ntBASIC1.34□□□□□ -2.19
VPS11Q9H270 SNORA67.5-201ENST00000391036 107 ntBASIC1.34□□□□□ -2.19
VPS11Q9H270 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
VPS11Q9H270 AC023827.1-201ENST00000569247 97 ntBASIC1.34□□□□□ -2.19
VPS11Q9H270 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
VPS11Q9H270 AC106800.4-201ENST00000614905 153 ntBASIC1.34□□□□□ -2.19
VPS11Q9H270 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 RNU6-987P-201ENST00000384759 104 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 MIR19B1-201ENST00000384829 87 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 MTND4LP19-201ENST00000403051 166 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 RNU7-21P-201ENST00000459430 62 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 RNA5SP404-201ENST00000517118 132 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 MIR8053-201ENST00000613344 75 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 MIR4773-1-201ENST00000637203 78 ntBASIC1.33□□□□□ -2.2
VPS11Q9H270 AC093423.1-201ENST00000440817 142 ntBASIC1.32□□□□□ -2.2
VPS11Q9H270 RNU7-102P-201ENST00000458948 62 ntBASIC1.32□□□□□ -2.2
VPS11Q9H270 MIR4511-201ENST00000582784 87 ntBASIC1.32□□□□□ -2.2
VPS11Q9H270 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VPS11Q9H270 Y_RNA.32-201ENST00000362589 110 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 RNU6-1216P-201ENST00000362590 107 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 RNU4-62P-201ENST00000410125 130 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 RNU4-37P-201ENST00000410214 84 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 AL603825.1-201ENST00000438481 80 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 RNU6-982P-201ENST00000516216 102 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 MIR4804-201ENST00000581683 73 ntBASIC1.31□□□□□ -2.2
VPS11Q9H270 MIR378A-201ENST00000362177 66 ntBASIC1.3□□□□□ -2.2
VPS11Q9H270 RNU6-499P-201ENST00000365615 107 ntBASIC1.3□□□□□ -2.2
VPS11Q9H270 AC244098.3-201ENST00000424803 96 ntBASIC1.3□□□□□ -2.2
VPS11Q9H270 RNU1-123P-201ENST00000458950 160 ntBASIC1.3□□□□□ -2.2
VPS11Q9H270 RNU7-90P-201ENST00000459216 62 ntBASIC1.3□□□□□ -2.2
VPS11Q9H270 uc_338.16-201ENST00000621804 95 ntBASIC1.3□□□□□ -2.2
VPS11Q9H270 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
VPS11Q9H270 RNA5SP403-201ENST00000363598 108 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU6-1187P-201ENST00000364771 110 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 Y_RNA.338-201ENST00000365320 114 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU6-1126P-201ENST00000384002 107 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 U3.27-201ENST00000391237 200 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 MIR938-201ENST00000401216 83 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 SNORD111-201ENST00000408139 94 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 AC110620.1-201ENST00000416042 228 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU7-56P-201ENST00000458744 62 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU6-274P-201ENST00000459566 107 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 SNORA31.14-201ENST00000516728 116 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU7-161P-201ENST00000517289 62 ntBASIC1.29□□□□□ -2.2
VPS11Q9H270 RNU6-364P-201ENST00000384387 107 ntBASIC1.28□□□□□ -2.2
VPS11Q9H270 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
VPS11Q9H270 RNU6-752P-201ENST00000516376 102 ntBASIC1.28□□□□□ -2.2
VPS11Q9H270 NAMPTP3-201ENST00000569273 224 ntBASIC1.28□□□□□ -2.2
VPS11Q9H270 MIR3920-201ENST00000581751 86 ntBASIC1.28□□□□□ -2.2
VPS11Q9H270 AL078603.1-201ENST00000603824 313 ntBASIC1.28□□□□□ -2.2
VPS11Q9H270 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS11Q9H270 RNU6-669P-201ENST00000365575 107 ntBASIC1.27□□□□□ -2.21
VPS11Q9H270 MIR633-201ENST00000384821 98 ntBASIC1.27□□□□□ -2.21
VPS11Q9H270 SNORD75.2-201ENST00000408784 58 ntBASIC1.27□□□□□ -2.21
VPS11Q9H270 AC103706.3-201ENST00000636297 85 ntBASIC1.27□□□□□ -2.21
VPS11Q9H270 RNU6-495P-201ENST00000362995 107 ntBASIC1.26□□□□□ -2.21
VPS11Q9H270 SNORD115-44-201ENST00000365391 82 ntBASIC1.26□□□□□ -2.21
VPS11Q9H270 RNU6-1057P-201ENST00000517162 102 ntBASIC1.26□□□□□ -2.21
VPS11Q9H270 SNORA40.17-201ENST00000517256 115 ntBASIC1.26□□□□□ -2.21
VPS11Q9H270 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
VPS11Q9H270 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS11Q9H270 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VPS11Q9H270 RNU6-54P-201ENST00000365563 107 ntBASIC1.25□□□□□ -2.21
VPS11Q9H270 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
VPS11Q9H270 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
VPS11Q9H270 RNU7-24P-201ENST00000458867 62 ntBASIC1.25□□□□□ -2.21
VPS11Q9H270 RNU7-13P-201ENST00000516413 62 ntBASIC1.25□□□□□ -2.21
VPS11Q9H270 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VPS11Q9H270 SNORD115-24-201ENST00000363528 82 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 1790.2 ms