Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU6-616P-201ENST00000384353 107 ntBASIC-1.96□□□□□ -2.72
TRIM4Q9C037 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.96□□□□□ -2.72
TRIM4Q9C037 SNORD116-29-201ENST00000384516 83 ntBASIC-1.96□□□□□ -2.72
TRIM4Q9C037 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.96□□□□□ -2.72
TRIM4Q9C037 AC138393.2-201ENST00000414742 246 ntBASIC-1.96□□□□□ -2.72
TRIM4Q9C037 RNU6-235P-201ENST00000362644 107 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 MIR451A-201ENST00000385059 72 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 RNU6-381P-201ENST00000391259 108 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 MIR548Q-201ENST00000408404 100 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 RNU7-164P-201ENST00000459221 62 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 MIR3123-201ENST00000583417 75 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 MIR548AM-201ENST00000584298 74 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 AC021443.1-201ENST00000604478 211 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 AC073869.6-201ENST00000640656 341 ntBASIC-1.97□□□□□ -2.72
TRIM4Q9C037 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.98□□□□□ -2.73
TRIM4Q9C037 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.98□□□□□ -2.73
TRIM4Q9C037 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.98□□□□□ -2.73
TRIM4Q9C037 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.98□□□□□ -2.73
TRIM4Q9C037 RNU7-123P-201ENST00000515911 60 ntBASIC-1.98□□□□□ -2.73
TRIM4Q9C037 RNA5SP236-201ENST00000516169 116 ntBASIC-1.98□□□□□ -2.73
TRIM4Q9C037 RNU6-719P-201ENST00000516671 104 ntBASIC-1.98□□□□□ -2.73
TRIM4Q9C037 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.99□□□□□ -2.73
TRIM4Q9C037 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.99□□□□□ -2.73
TRIM4Q9C037 RNU6-121P-201ENST00000410525 99 ntBASIC-1.99□□□□□ -2.73
TRIM4Q9C037 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.99□□□□□ -2.73
TRIM4Q9C037 RNU6-718P-201ENST00000516166 105 ntBASIC-1.99□□□□□ -2.73
TRIM4Q9C037 AC138907.4-201ENST00000570107 226 ntBASIC-1.99□□□□□ -2.73
TRIM4Q9C037 AC084782.3-201ENST00000612282 578 ntBASIC-1.99□□□□□ -2.73
TRIM4Q9C037 RNU6-240P-201ENST00000516098 97 ntBASIC-2□□□□□ -2.73
TRIM4Q9C037 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2□□□□□ -2.73
TRIM4Q9C037 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2□□□□□ -2.73
TRIM4Q9C037 RNU6-841P-201ENST00000383872 107 ntBASIC-2.01□□□□□ -2.73
TRIM4Q9C037 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.01□□□□□ -2.73
TRIM4Q9C037 SNORD116-6-201ENST00000384711 96 ntBASIC-2.01□□□□□ -2.73
TRIM4Q9C037 AL121914.1-201ENST00000450188 156 ntBASIC-2.01□□□□□ -2.73
TRIM4Q9C037 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.01□□□□□ -2.73
TRIM4Q9C037 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.01□□□□□ -2.73
TRIM4Q9C037 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 U7.5-201ENST00000517224 61 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 AP002392.1-201ENST00000537692 208 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 AC092794.1-201ENST00000612734 582 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 AC090574.1-201ENST00000623186 233 ntBASIC-2.02□□□□□ -2.73
TRIM4Q9C037 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.02□□□□□ -2.73
TRIM4Q9C037 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.03□□□□□ -2.73
TRIM4Q9C037 SNORA33.1-201ENST00000364957 130 ntBASIC-2.03□□□□□ -2.73
TRIM4Q9C037 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.03□□□□□ -2.73
TRIM4Q9C037 ELOCP20-201ENST00000422460 345 ntBASIC-2.03□□□□□ -2.73
TRIM4Q9C037 RNA5SP147-201ENST00000516493 109 ntBASIC-2.03□□□□□ -2.73
TRIM4Q9C037 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.03□□□□□ -2.73
TRIM4Q9C037 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 SNORA63.7-201ENST00000365579 123 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 RNU6-258P-201ENST00000390884 101 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 MIR1302-11-201ENST00000408051 138 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 MIR1302-9-201ENST00000408365 138 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 MIR548F1-201ENST00000408667 84 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 MIR1302-10-201ENST00000408734 138 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 FGF7P7-201ENST00000514120 227 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 MIR1302-2-201ENST00000607096 138 ntBASIC-2.04□□□□□ -2.74
TRIM4Q9C037 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.05□□□□□ -2.74
TRIM4Q9C037 RNU6-774P-201ENST00000363238 107 ntBASIC-2.05□□□□□ -2.74
TRIM4Q9C037 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.05□□□□□ -2.74
TRIM4Q9C037 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.05□□□□□ -2.74
TRIM4Q9C037 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.05□□□□□ -2.74
TRIM4Q9C037 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.05□□□□□ -2.74
TRIM4Q9C037 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.05□□□□□ -2.74
TRIM4Q9C037 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 CYP3A54P-201ENST00000566950 75 ntBASIC-2.06□□□□□ -2.74
TRIM4Q9C037 RNU6-103P-201ENST00000363686 107 ntBASIC-2.07□□□□□ -2.74
TRIM4Q9C037 RNU6-563P-201ENST00000364872 108 ntBASIC-2.07□□□□□ -2.74
TRIM4Q9C037 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.07□□□□□ -2.74
TRIM4Q9C037 RNU7-152P-201ENST00000458982 64 ntBASIC-2.07□□□□□ -2.74
TRIM4Q9C037 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.07□□□□□ -2.74
TRIM4Q9C037 MTND3P22-201ENST00000510932 243 ntBASIC-2.07□□□□□ -2.74
TRIM4Q9C037 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.07□□□□□ -2.74
TRIM4Q9C037 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.08□□□□□ -2.74
TRIM4Q9C037 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.08□□□□□ -2.74
TRIM4Q9C037 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.08□□□□□ -2.74
TRIM4Q9C037 Z83846.1-201ENST00000446798 265 ntBASIC-2.08□□□□□ -2.74
TRIM4Q9C037 SNORD2.1-201ENST00000458762 69 ntBASIC-2.08□□□□□ -2.74
TRIM4Q9C037 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.08□□□□□ -2.74
TRIM4Q9C037 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 RNU6-976P-201ENST00000516086 111 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 RNU6-521P-201ENST00000516663 105 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.09□□□□□ -2.74
TRIM4Q9C037 AL365265.1-201ENST00000621045 234 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 324 ms