Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 AC097635.1-201ENST00000450678 155 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
CHFRQ96EP1 SNORD45.1-201ENST00000363181 77 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 Y_RNA.443-201ENST00000384135 111 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 MIR451A-201ENST00000385059 72 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 MIR599-201ENST00000385069 95 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 MIR1257-201ENST00000408490 117 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 RNU4-37P-201ENST00000410214 84 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
CHFRQ96EP1 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 RNU6-881P-201ENST00000516813 102 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 RNU6-765P-201ENST00000516916 99 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 RNU6-165P-201ENST00000517170 99 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.37□□□□□ -2.19
CHFRQ96EP1 SNORA25.4-201ENST00000363666 124 ntBASIC1.36□□□□□ -2.19
CHFRQ96EP1 RNU6-681P-201ENST00000364012 104 ntBASIC1.36□□□□□ -2.19
CHFRQ96EP1 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
CHFRQ96EP1 RNU6-935P-201ENST00000410371 100 ntBASIC1.36□□□□□ -2.19
CHFRQ96EP1 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
CHFRQ96EP1 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
CHFRQ96EP1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CHFRQ96EP1 SNORD113.1-201ENST00000363280 73 ntBASIC1.35□□□□□ -2.19
CHFRQ96EP1 RNU6-895P-201ENST00000384125 103 ntBASIC1.35□□□□□ -2.19
CHFRQ96EP1 AC093423.1-201ENST00000440817 142 ntBASIC1.35□□□□□ -2.19
CHFRQ96EP1 AC036111.3-201ENST00000526389 112 ntBASIC1.35□□□□□ -2.19
CHFRQ96EP1 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
CHFRQ96EP1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
CHFRQ96EP1 RNU6-934P-201ENST00000365154 107 ntBASIC1.34□□□□□ -2.19
CHFRQ96EP1 RNU6-499P-201ENST00000365615 107 ntBASIC1.34□□□□□ -2.19
CHFRQ96EP1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CHFRQ96EP1 MIR125B2-201ENST00000385128 89 ntBASIC1.34□□□□□ -2.19
CHFRQ96EP1 RNU6-604P-201ENST00000390917 100 ntBASIC1.34□□□□□ -2.19
CHFRQ96EP1 AL109933.3-201ENST00000619095 188 ntBASIC1.34□□□□□ -2.19
CHFRQ96EP1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CHFRQ96EP1 RNU1-93P-201ENST00000364704 169 ntBASIC1.33□□□□□ -2.2
CHFRQ96EP1 RNU6-382P-201ENST00000365181 106 ntBASIC1.33□□□□□ -2.2
CHFRQ96EP1 AC138907.6-201ENST00000568401 126 ntBASIC1.33□□□□□ -2.2
CHFRQ96EP1 AC138869.1-201ENST00000568623 124 ntBASIC1.33□□□□□ -2.2
CHFRQ96EP1 MIR8053-201ENST00000613344 75 ntBASIC1.33□□□□□ -2.2
CHFRQ96EP1 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
CHFRQ96EP1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.32□□□□□ -2.2
CHFRQ96EP1 RNU6-1216P-201ENST00000362590 107 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 SNORD113.3-201ENST00000364630 78 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.32□□□□□ -2.2
CHFRQ96EP1 RNU6-287P-201ENST00000516230 98 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 MIR4771-2-201ENST00000577758 74 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 MIR4771-1-201ENST00000582617 74 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 MIR4511-201ENST00000582784 87 ntBASIC1.32□□□□□ -2.2
CHFRQ96EP1 RNU6-369P-201ENST00000362515 102 ntBASIC1.31□□□□□ -2.2
CHFRQ96EP1 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
CHFRQ96EP1 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
CHFRQ96EP1 MIR4773-1-201ENST00000637203 78 ntBASIC1.31□□□□□ -2.2
CHFRQ96EP1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHFRQ96EP1 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 RNU6-535P-201ENST00000384722 107 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 AC110620.1-201ENST00000416042 228 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 AC244505.6-201ENST00000452829 130 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 snoU13.18-201ENST00000459483 104 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 MIR4676-201ENST00000583078 72 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 RMST_2.1-201ENST00000617263 136 ntBASIC1.3□□□□□ -2.2
CHFRQ96EP1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHFRQ96EP1 RPS26P5-201ENST00000418544 335 ntBASIC1.29□□□□□ -2.2
CHFRQ96EP1 RNU6-982P-201ENST00000516216 102 ntBASIC1.29□□□□□ -2.2
CHFRQ96EP1 MIR548AG2-201ENST00000581228 64 ntBASIC1.29□□□□□ -2.2
CHFRQ96EP1 AC008608.1-201ENST00000603910 127 ntBASIC1.29□□□□□ -2.2
CHFRQ96EP1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.29□□□□□ -2.2
CHFRQ96EP1 AC103706.3-201ENST00000636297 85 ntBASIC1.29□□□□□ -2.2
CHFRQ96EP1 MIR633-201ENST00000384821 98 ntBASIC1.28□□□□□ -2.2
CHFRQ96EP1 U3.27-201ENST00000391237 200 ntBASIC1.28□□□□□ -2.2
CHFRQ96EP1 AC244098.3-201ENST00000424803 96 ntBASIC1.28□□□□□ -2.2
CHFRQ96EP1 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
CHFRQ96EP1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 RNU6-669P-201ENST00000365575 107 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 RNU7-102P-201ENST00000458948 62 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 RNU6-274P-201ENST00000459566 107 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 RNU6-752P-201ENST00000516376 102 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 RN7SKP88-201ENST00000516847 250 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 AC023827.1-201ENST00000569247 97 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 7SK.8-201ENST00000612110 250 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 7SK.11-201ENST00000615477 250 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 7SK.13-201ENST00000622040 250 ntBASIC1.27□□□□□ -2.21
CHFRQ96EP1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.26□□□□□ -2.21
CHFRQ96EP1 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
CHFRQ96EP1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CHFRQ96EP1 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
CHFRQ96EP1 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
CHFRQ96EP1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHFRQ96EP1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.25□□□□□ -2.21
CHFRQ96EP1 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms