Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC067863.3-201ENST00000624172 122 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
HIPK4Q8NE63 RNU6-1126P-201ENST00000384002 107 ntBASIC0.89□□□□□ -2.27
HIPK4Q8NE63 RNU7-171P-201ENST00000459581 62 ntBASIC0.89□□□□□ -2.27
HIPK4Q8NE63 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.89□□□□□ -2.27
HIPK4Q8NE63 RNA5SP94-201ENST00000516917 108 ntBASIC0.89□□□□□ -2.27
HIPK4Q8NE63 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
HIPK4Q8NE63 RNU6-726P-201ENST00000364680 107 ntBASIC0.88□□□□□ -2.27
HIPK4Q8NE63 RNU6-1276P-201ENST00000365372 104 ntBASIC0.88□□□□□ -2.27
HIPK4Q8NE63 Y_RNA.426-201ENST00000384068 113 ntBASIC0.88□□□□□ -2.27
HIPK4Q8NE63 SNORD41.1-201ENST00000391000 69 ntBASIC0.88□□□□□ -2.27
HIPK4Q8NE63 RNU6-935P-201ENST00000410371 100 ntBASIC0.88□□□□□ -2.27
HIPK4Q8NE63 AC140658.3-201ENST00000567603 271 ntBASIC0.88□□□□□ -2.27
HIPK4Q8NE63 SNORD115-37-201ENST00000363768 82 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 RNU6-573P-201ENST00000383938 106 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 SNORD90-201ENST00000391145 111 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 MIR2113-201ENST00000459007 91 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 SNORA25.13-201ENST00000516395 103 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.87□□□□□ -2.27
HIPK4Q8NE63 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HIPK4Q8NE63 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
HIPK4Q8NE63 SNORA36.2-201ENST00000384004 127 ntBASIC0.86□□□□□ -2.27
HIPK4Q8NE63 RNU6-242P-201ENST00000384359 107 ntBASIC0.86□□□□□ -2.27
HIPK4Q8NE63 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
HIPK4Q8NE63 MIR140-201ENST00000385282 100 ntBASIC0.85□□□□□ -2.27
HIPK4Q8NE63 Y_RNA.607-201ENST00000410597 98 ntBASIC0.85□□□□□ -2.27
HIPK4Q8NE63 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
HIPK4Q8NE63 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
HIPK4Q8NE63 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.85□□□□□ -2.27
HIPK4Q8NE63 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 RNU6-787P-201ENST00000384032 107 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 RNU6-110P-201ENST00000384508 104 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 MIR617-201ENST00000385030 97 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 MIR451A-201ENST00000385059 72 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 MIR548L-201ENST00000408303 86 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 RNA5SP268-201ENST00000516828 124 ntBASIC0.83□□□□□ -2.28
HIPK4Q8NE63 RNU6-1051P-201ENST00000365471 102 ntBASIC0.82□□□□□ -2.28
HIPK4Q8NE63 MIR519E-201ENST00000385075 84 ntBASIC0.82□□□□□ -2.28
HIPK4Q8NE63 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
HIPK4Q8NE63 RNA5SP227-201ENST00000516184 113 ntBASIC0.82□□□□□ -2.28
HIPK4Q8NE63 MIR4666B-201ENST00000578142 81 ntBASIC0.82□□□□□ -2.28
HIPK4Q8NE63 MIR7107-201ENST00000611489 80 ntBASIC0.82□□□□□ -2.28
HIPK4Q8NE63 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
HIPK4Q8NE63 RNU6-624P-201ENST00000363411 107 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 SNORD114-27-201ENST00000363766 70 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 SNORA8.2-201ENST00000384372 139 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 MIR3140-201ENST00000583685 90 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
HIPK4Q8NE63 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
HIPK4Q8NE63 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
HIPK4Q8NE63 AL162376.1-201ENST00000624117 175 ntBASIC0.8□□□□□ -2.28
HIPK4Q8NE63 MIR1245B-201ENST00000636115 69 ntBASIC0.8□□□□□ -2.28
HIPK4Q8NE63 SNORA63.2-201ENST00000362603 126 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 Y_RNA.219-201ENST00000364232 113 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 Y_RNA.316-201ENST00000365118 111 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 RNU6-269P-201ENST00000391077 97 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 RNU6-1057P-201ENST00000517162 102 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
HIPK4Q8NE63 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.79□□□□□ -2.28
HIPK4Q8NE63 Y_RNA.164-201ENST00000363709 102 ntBASIC0.78□□□□□ -2.28
HIPK4Q8NE63 SNORA24B-201ENST00000384176 131 ntBASIC0.78□□□□□ -2.28
HIPK4Q8NE63 AC093423.1-201ENST00000440817 142 ntBASIC0.78□□□□□ -2.28
HIPK4Q8NE63 RNU7-74P-201ENST00000459104 62 ntBASIC0.78□□□□□ -2.28
HIPK4Q8NE63 FGF7P7-201ENST00000514120 227 ntBASIC0.78□□□□□ -2.28
HIPK4Q8NE63 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
HIPK4Q8NE63 Y_RNA.437-201ENST00000384113 113 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 U3.27-201ENST00000391237 200 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 RNU6-1052P-201ENST00000411398 104 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 AL450471.1-201ENST00000447509 127 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 RNU6-719P-201ENST00000516671 104 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 AC092634.7-201ENST00000621022 103 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 MIR3202-2-201ENST00000635980 79 ntBASIC0.77□□□□□ -2.29
HIPK4Q8NE63 RNU6-228P-201ENST00000362700 106 ntBASIC0.76□□□□□ -2.29
HIPK4Q8NE63 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.76□□□□□ -2.29
HIPK4Q8NE63 snoU13.17-201ENST00000458802 104 ntBASIC0.76□□□□□ -2.29
HIPK4Q8NE63 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
HIPK4Q8NE63 RNU6-478P-201ENST00000363904 110 ntBASIC0.75□□□□□ -2.29
HIPK4Q8NE63 Y_RNA.313-201ENST00000365095 103 ntBASIC0.75□□□□□ -2.29
HIPK4Q8NE63 RNY4P3-201ENST00000365254 95 ntBASIC0.75□□□□□ -2.29
HIPK4Q8NE63 RNU6-652P-201ENST00000365488 107 ntBASIC0.75□□□□□ -2.29
HIPK4Q8NE63 RNU6-1124P-201ENST00000384169 107 ntBASIC0.75□□□□□ -2.29
HIPK4Q8NE63 SNORA25.18-201ENST00000607153 114 ntBASIC0.75□□□□□ -2.29
HIPK4Q8NE63 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HIPK4Q8NE63 SNORD118-201ENST00000363593 134 ntBASIC0.74□□□□□ -2.29
HIPK4Q8NE63 SNORD78.1-201ENST00000390866 65 ntBASIC0.74□□□□□ -2.29
HIPK4Q8NE63 RNU6-557P-201ENST00000516842 110 ntBASIC0.74□□□□□ -2.29
HIPK4Q8NE63 RNU5F-1-201ENST00000362507 117 ntBASIC0.73□□□□□ -2.29
HIPK4Q8NE63 MIR216B-201ENST00000390186 82 ntBASIC0.73□□□□□ -2.29
HIPK4Q8NE63 RNU6-129P-201ENST00000391022 107 ntBASIC0.73□□□□□ -2.29
HIPK4Q8NE63 SNORA40.8-201ENST00000411034 126 ntBASIC0.73□□□□□ -2.29
HIPK4Q8NE63 RNA5SP484-201ENST00000458857 111 ntBASIC0.73□□□□□ -2.29
HIPK4Q8NE63 RNU6-1108P-201ENST00000516308 104 ntBASIC0.73□□□□□ -2.29
HIPK4Q8NE63 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
HIPK4Q8NE63 RNU6-161P-201ENST00000363051 106 ntBASIC0.72□□□□□ -2.29
HIPK4Q8NE63 RNU1-141P-201ENST00000364623 158 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 302.7 ms