Protein–RNA interactions for Protein: Q3V6T2

CCDC88A, Girdin, humanhuman

Predictions only

Length 1,871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88AQ3V6T2 RNU6-875P-201ENST00000516488 106 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 AL365265.1-201ENST00000621045 234 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 MIR548H3-201ENST00000408771 118 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 RNU6-935P-201ENST00000410371 100 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 U6atac.1-201ENST00000616025 117 ntBASIC-1.46□□□□□ -2.64
CCDC88AQ3V6T2 RNY4P28-201ENST00000365281 93 ntBASIC-1.47□□□□□ -2.64
CCDC88AQ3V6T2 MIR496-201ENST00000385226 102 ntBASIC-1.47□□□□□ -2.64
CCDC88AQ3V6T2 AC097510.1-201ENST00000510945 133 ntBASIC-1.47□□□□□ -2.64
CCDC88AQ3V6T2 MIR4536-1-201ENST00000583537 88 ntBASIC-1.47□□□□□ -2.64
CCDC88AQ3V6T2 AC091912.2-201ENST00000624798 167 ntBASIC-1.47□□□□□ -2.64
CCDC88AQ3V6T2 AL512310.12-203ENST00000640543 90 ntBASIC-1.47□□□□□ -2.64
CCDC88AQ3V6T2 MIR369-201ENST00000362155 70 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-719P-201ENST00000516671 104 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 MIR147A-201ENST00000385079 72 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-588P-201ENST00000410281 105 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNA5SP272-201ENST00000516095 111 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 snoU83B.1-201ENST00000517136 88 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.48□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-363P-201ENST00000362895 105 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 SNORD38.1-201ENST00000363863 68 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 MIR451A-201ENST00000385059 72 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 MT-TI-201ENST00000387365 69 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-983P-201ENST00000516004 103 ntBASIC-1.49□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-616P-201ENST00000384353 107 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 AL353813.1-201ENST00000440700 253 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-450P-201ENST00000364654 107 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 MIR34C-201ENST00000384831 77 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 MIR759-201ENST00000390224 91 ntBASIC-1.5□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-54P-201ENST00000365563 107 ntBASIC-1.51□□□□□ -2.65
CCDC88AQ3V6T2 SNORA26.4-201ENST00000391188 123 ntBASIC-1.51□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 MIR527-201ENST00000385244 85 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-466P-201ENST00000391224 103 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 AL445584.3-201ENST00000617173 78 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-508P-201ENST00000363231 103 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 SNORD42B-201ENST00000458893 67 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 RNY3P16-201ENST00000516338 101 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 AC134503.1-201ENST00000633048 54 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 MIR1255B1-201ENST00000636325 63 ntBASIC-1.52□□□□□ -2.65
CCDC88AQ3V6T2 SNORA75.5-201ENST00000391291 81 ntBASIC-1.53□□□□□ -2.65
CCDC88AQ3V6T2 MIR8485-201ENST00000401372 91 ntBASIC-1.53□□□□□ -2.65
CCDC88AQ3V6T2 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MIR29B1-201ENST00000385015 81 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 RBMX2P4-201ENST00000441256 376 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MTND1P19-201ENST00000511780 315 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-924P-201ENST00000362926 108 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MIR124-2-201ENST00000385081 109 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-493P-201ENST00000391321 108 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MTATP6P21-201ENST00000440681 189 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MTND5P20-201ENST00000448677 143 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 MIR6739-201ENST00000622461 75 ntBASIC-1.54□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-312P-201ENST00000364629 107 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 RNY3P1-201ENST00000365085 102 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 SNORD50.2-201ENST00000365465 70 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 MIR3163-201ENST00000581592 73 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 AC108081.1-201ENST00000604358 221 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 U2.14-201ENST00000615943 113 ntBASIC-1.55□□□□□ -2.66
CCDC88AQ3V6T2 CYP3A54P-201ENST00000566950 75 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 AL353803.5-201ENST00000599815 141 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-208P-201ENST00000362431 107 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 MIR548G-201ENST00000408442 89 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 AL589823.1-201ENST00000429577 183 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 U6.106-201ENST00000636360 105 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 AC132825.6-201ENST00000638861 357 ntBASIC-1.56□□□□□ -2.66
CCDC88AQ3V6T2 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.57□□□□□ -2.66
CCDC88AQ3V6T2 AL161932.1-201ENST00000437408 146 ntBASIC-1.57□□□□□ -2.66
CCDC88AQ3V6T2 RNY4-201ENST00000516507 96 ntBASIC-1.57□□□□□ -2.66
CCDC88AQ3V6T2 SNORA63.2-201ENST00000362603 126 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-275P-201ENST00000364910 107 ntBASIC-1.58□□□□□ -2.66
CCDC88AQ3V6T2 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms