Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MIR518E-201ENST00000385252 88 ntBASIC0.91□□□□□ -2.26
WNT3AP56704 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
WNT3AP56704 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.91□□□□□ -2.26
WNT3AP56704 AC093729.1-201ENST00000513074 128 ntBASIC0.91□□□□□ -2.26
WNT3AP56704 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
WNT3AP56704 RNU6-716P-201ENST00000365621 103 ntBASIC0.9□□□□□ -2.27
WNT3AP56704 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
WNT3AP56704 RNU6-135P-201ENST00000516769 101 ntBASIC0.9□□□□□ -2.27
WNT3AP56704 MIR4639-201ENST00000584938 69 ntBASIC0.9□□□□□ -2.27
WNT3AP56704 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
WNT3AP56704 Y_RNA.437-201ENST00000384113 113 ntBASIC0.88□□□□□ -2.27
WNT3AP56704 SNORD90-201ENST00000391145 111 ntBASIC0.88□□□□□ -2.27
WNT3AP56704 RNU6-287P-201ENST00000516230 98 ntBASIC0.88□□□□□ -2.27
WNT3AP56704 AC067863.3-201ENST00000624172 122 ntBASIC0.88□□□□□ -2.27
WNT3AP56704 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
WNT3AP56704 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 Y_RNA.207-201ENST00000364142 106 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 RNU7-171P-201ENST00000459581 62 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 SNORA25.13-201ENST00000516395 103 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 RNA5SP47-201ENST00000517230 109 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.87□□□□□ -2.27
WNT3AP56704 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
WNT3AP56704 Y_RNA.224-201ENST00000364308 111 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 MIR451A-201ENST00000385059 72 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 RNU6-935P-201ENST00000410371 100 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 RNU6-1052P-201ENST00000411398 104 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 FGF7P7-201ENST00000514120 227 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 RNU6-719P-201ENST00000516671 104 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 RNU6-1057P-201ENST00000517162 102 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 MTRNR2L2-201ENST00000604882 87 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.86□□□□□ -2.27
WNT3AP56704 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
WNT3AP56704 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 SNORD115-44-201ENST00000365391 82 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 SNORD114-22-201ENST00000365423 72 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 Y_RNA.607-201ENST00000410597 98 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 MIR2113-201ENST00000459007 91 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 RNA5SP94-201ENST00000516917 108 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 MIR3920-201ENST00000581751 86 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 MIR4452-201ENST00000583004 71 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.85□□□□□ -2.27
WNT3AP56704 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
WNT3AP56704 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 Y_RNA.355-201ENST00000365462 98 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 RNU6-652P-201ENST00000365488 107 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 RNU6-1126P-201ENST00000384002 107 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 RNU6-1124P-201ENST00000384169 107 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 SCARNA16.5-201ENST00000517114 183 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 AC140658.3-201ENST00000567603 271 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 MIR548AG2-201ENST00000581228 64 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 MIR3140-201ENST00000583685 90 ntBASIC0.84□□□□□ -2.27
WNT3AP56704 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
WNT3AP56704 Y_RNA.219-201ENST00000364232 113 ntBASIC0.83□□□□□ -2.28
WNT3AP56704 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.83□□□□□ -2.28
WNT3AP56704 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
WNT3AP56704 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
WNT3AP56704 RNA5SP227-201ENST00000516184 113 ntBASIC0.83□□□□□ -2.28
WNT3AP56704 RNU6-228P-201ENST00000362700 106 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 SNORA36.1-201ENST00000363424 132 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 Y_RNA.313-201ENST00000365095 103 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 RNU6-1051P-201ENST00000365471 102 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 AL450471.1-201ENST00000447509 127 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 RNU6-1108P-201ENST00000516308 104 ntBASIC0.82□□□□□ -2.28
WNT3AP56704 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.82□□□□□ -2.28
WNT3AP56704 Y_RNA.316-201ENST00000365118 111 ntBASIC0.81□□□□□ -2.28
WNT3AP56704 RNU6-787P-201ENST00000384032 107 ntBASIC0.81□□□□□ -2.28
WNT3AP56704 MIR140-201ENST00000385282 100 ntBASIC0.81□□□□□ -2.28
WNT3AP56704 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
WNT3AP56704 RNU6-161P-201ENST00000363051 106 ntBASIC0.8□□□□□ -2.28
WNT3AP56704 RNU6-726P-201ENST00000364680 107 ntBASIC0.8□□□□□ -2.28
WNT3AP56704 SNORD78.1-201ENST00000390866 65 ntBASIC0.8□□□□□ -2.28
WNT3AP56704 RNA5SP268-201ENST00000516828 124 ntBASIC0.8□□□□□ -2.28
WNT3AP56704 MIR4666B-201ENST00000578142 81 ntBASIC0.8□□□□□ -2.28
WNT3AP56704 MIR3202-2-201ENST00000635980 79 ntBASIC0.8□□□□□ -2.28
WNT3AP56704 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
WNT3AP56704 MIR1255A-201ENST00000408338 113 ntBASIC0.79□□□□□ -2.28
WNT3AP56704 RNA5SP225-201ENST00000410874 135 ntBASIC0.79□□□□□ -2.28
WNT3AP56704 MIR7111-201ENST00000619751 72 ntBASIC0.79□□□□□ -2.28
WNT3AP56704 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
WNT3AP56704 RNU5F-1-201ENST00000362507 117 ntBASIC0.78□□□□□ -2.28
WNT3AP56704 MIR617-201ENST00000385030 97 ntBASIC0.78□□□□□ -2.28
WNT3AP56704 MIR519E-201ENST00000385075 84 ntBASIC0.78□□□□□ -2.28
WNT3AP56704 SNORD41.1-201ENST00000391000 69 ntBASIC0.78□□□□□ -2.28
WNT3AP56704 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.78□□□□□ -2.28
WNT3AP56704 MIR7107-201ENST00000611489 80 ntBASIC0.78□□□□□ -2.28
WNT3AP56704 Y_RNA.118-201ENST00000363300 101 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 RNA5SP517-201ENST00000364724 117 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 MIR520E-201ENST00000384867 87 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 RNU6-269P-201ENST00000391077 97 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 snoU13.18-201ENST00000459483 104 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 SNORA25.18-201ENST00000607153 114 ntBASIC0.77□□□□□ -2.29
WNT3AP56704 AC092634.7-201ENST00000621022 103 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms