Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NCKAP1LP55160 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NCKAP1LP55160 RNU6-590P-201ENST00000365039 107 ntBASIC1.36□□□□□ -2.19
NCKAP1LP55160 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
NCKAP1LP55160 snoU13.18-201ENST00000459483 104 ntBASIC1.36□□□□□ -2.19
NCKAP1LP55160 SNORA70.22-201ENST00000517160 124 ntBASIC1.36□□□□□ -2.19
NCKAP1LP55160 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
NCKAP1LP55160 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
NCKAP1LP55160 MIR1-1-201ENST00000362147 71 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 RNA5SP403-201ENST00000363598 108 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 SNORD115-44-201ENST00000365391 82 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 RNU1-119P-201ENST00000391122 165 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 U3.27-201ENST00000391237 200 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 RNU6-634P-201ENST00000459134 106 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 AC097510.1-201ENST00000510945 133 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 RNU6-70P-201ENST00000516438 60 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 U6.81-201ENST00000612550 106 ntBASIC1.35□□□□□ -2.19
NCKAP1LP55160 Y_RNA.174-201ENST00000363781 105 ntBASIC1.34□□□□□ -2.19
NCKAP1LP55160 Y_RNA.224-201ENST00000364308 111 ntBASIC1.34□□□□□ -2.19
NCKAP1LP55160 RNU6-994P-201ENST00000410507 111 ntBASIC1.34□□□□□ -2.19
NCKAP1LP55160 RNU6-871P-201ENST00000516122 100 ntBASIC1.34□□□□□ -2.19
NCKAP1LP55160 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
NCKAP1LP55160 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NCKAP1LP55160 Y_RNA.32-201ENST00000362589 110 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 RNU6-154P-201ENST00000384306 106 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 RNU6-587P-201ENST00000391282 106 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 RNU6-287P-201ENST00000516230 98 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 SNORA31.14-201ENST00000516728 116 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 RMST_2.1-201ENST00000617263 136 ntBASIC1.33□□□□□ -2.2
NCKAP1LP55160 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NCKAP1LP55160 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
NCKAP1LP55160 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
NCKAP1LP55160 MIR451A-201ENST00000385059 72 ntBASIC1.32□□□□□ -2.2
NCKAP1LP55160 MIR664A-201ENST00000626086 82 ntBASIC1.32□□□□□ -2.2
NCKAP1LP55160 RNU6-330P-201ENST00000363015 107 ntBASIC1.31□□□□□ -2.2
NCKAP1LP55160 RNU6-824P-201ENST00000363724 104 ntBASIC1.31□□□□□ -2.2
NCKAP1LP55160 RNU6-681P-201ENST00000364012 104 ntBASIC1.31□□□□□ -2.2
NCKAP1LP55160 RNU6-392P-201ENST00000364926 101 ntBASIC1.31□□□□□ -2.2
NCKAP1LP55160 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.31□□□□□ -2.2
NCKAP1LP55160 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NCKAP1LP55160 MIR520F-201ENST00000384824 87 ntBASIC1.3□□□□□ -2.2
NCKAP1LP55160 MIR2113-201ENST00000459007 91 ntBASIC1.3□□□□□ -2.2
NCKAP1LP55160 RNU7-161P-201ENST00000517289 62 ntBASIC1.3□□□□□ -2.2
NCKAP1LP55160 MIR548AG2-201ENST00000581228 64 ntBASIC1.3□□□□□ -2.2
NCKAP1LP55160 MIR3920-201ENST00000581751 86 ntBASIC1.3□□□□□ -2.2
NCKAP1LP55160 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NCKAP1LP55160 Y_RNA.371-201ENST00000365591 113 ntBASIC1.29□□□□□ -2.2
NCKAP1LP55160 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
NCKAP1LP55160 MIR6504-201ENST00000613520 61 ntBASIC1.29□□□□□ -2.2
NCKAP1LP55160 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
NCKAP1LP55160 RNU6-1126P-201ENST00000384002 107 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 RNU6-1241P-201ENST00000384536 107 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 AC067940.1-201ENST00000458411 300 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 RNU7-13P-201ENST00000516413 62 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.28□□□□□ -2.2
NCKAP1LP55160 SNORD115-24-201ENST00000363528 82 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 SNORA8.1-201ENST00000384250 140 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 RNU6-540P-201ENST00000384622 101 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 RNU6-1177P-201ENST00000391058 104 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 AC002350.1-201ENST00000490759 375 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 AL078603.1-201ENST00000603824 313 ntBASIC1.27□□□□□ -2.21
NCKAP1LP55160 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.27□□□□□ -2.21
NCKAP1LP55160 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NCKAP1LP55160 RNU6-42P-201ENST00000384165 107 ntBASIC1.26□□□□□ -2.21
NCKAP1LP55160 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
NCKAP1LP55160 RNU6-1052P-201ENST00000411398 104 ntBASIC1.26□□□□□ -2.21
NCKAP1LP55160 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
NCKAP1LP55160 RNU6-719P-201ENST00000516671 104 ntBASIC1.26□□□□□ -2.21
NCKAP1LP55160 MIR3675-201ENST00000583661 73 ntBASIC1.26□□□□□ -2.21
NCKAP1LP55160 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 Y_RNA.258-201ENST00000364613 105 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 Y_RNA.386-201ENST00000383913 105 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 MIR617-201ENST00000385030 97 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 MIR216B-201ENST00000390186 82 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
NCKAP1LP55160 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 RNA5SP220-201ENST00000516298 104 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 RNU6-135P-201ENST00000516769 101 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 RNU6-1057P-201ENST00000517162 102 ntBASIC1.25□□□□□ -2.21
NCKAP1LP55160 SNORD115-31-201ENST00000365318 82 ntBASIC1.24□□□□□ -2.21
NCKAP1LP55160 RNU7-24P-201ENST00000458867 62 ntBASIC1.24□□□□□ -2.21
NCKAP1LP55160 U7.7-201ENST00000459276 60 ntBASIC1.24□□□□□ -2.21
NCKAP1LP55160 RNU6-752P-201ENST00000516376 102 ntBASIC1.24□□□□□ -2.21
NCKAP1LP55160 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
NCKAP1LP55160 AL136317.1-201ENST00000612653 226 ntBASIC1.23□□□□□ -2.21
NCKAP1LP55160 SNORD41.1-201ENST00000391000 69 ntBASIC1.22□□□□□ -2.21
NCKAP1LP55160 FABP5P4-201ENST00000437203 171 ntBASIC1.22□□□□□ -2.21
NCKAP1LP55160 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
NCKAP1LP55160 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
NCKAP1LP55160 MIR4639-201ENST00000584938 69 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms