Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-81P-201ENST00000365608 104 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 RNU6-880P-201ENST00000384526 107 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 MIR519E-201ENST00000385075 84 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 AC008267.6-201ENST00000441664 139 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 MIR2113-201ENST00000459007 91 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 AC069503.3-201ENST00000618674 145 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
NEK3P51956 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 RNU6-161P-201ENST00000363051 106 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 SNORD45B-201ENST00000364617 72 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 MIR216B-201ENST00000390186 82 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 SNORA75.1-201ENST00000391130 148 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 SNORA25.13-201ENST00000516395 103 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 MIR548AG2-201ENST00000581228 64 ntBASIC-0.05□□□□□ -2.42
NEK3P51956 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 AC093423.1-201ENST00000440817 142 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 RNU6-287P-201ENST00000516230 98 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.06□□□□□ -2.42
NEK3P51956 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.07□□□□□ -2.42
NEK3P51956 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.07□□□□□ -2.42
NEK3P51956 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
NEK3P51956 MIR593-201ENST00000384856 100 ntBASIC-0.08□□□□□ -2.42
NEK3P51956 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
NEK3P51956 MIR548H2-201ENST00000408874 88 ntBASIC-0.08□□□□□ -2.42
NEK3P51956 HMGN2P22-201ENST00000427588 175 ntBASIC-0.08□□□□□ -2.42
NEK3P51956 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.08□□□□□ -2.42
NEK3P51956 AC104692.1-201ENST00000472406 90 ntBASIC-0.08□□□□□ -2.42
NEK3P51956 U6.100-201ENST00000636230 99 ntBASIC-0.08□□□□□ -2.42
NEK3P51956 RNU6-957P-201ENST00000363652 99 ntBASIC-0.09□□□□□ -2.42
NEK3P51956 MIR181B2-201ENST00000385004 89 ntBASIC-0.09□□□□□ -2.42
NEK3P51956 RNU4-36P-201ENST00000364294 144 ntBASIC-0.1□□□□□ -2.43
NEK3P51956 SNORD116-21-201ENST00000384507 92 ntBASIC-0.1□□□□□ -2.43
NEK3P51956 MIR329-2-201ENST00000385029 84 ntBASIC-0.1□□□□□ -2.43
NEK3P51956 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.43
NEK3P51956 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 SNORA51.5-201ENST00000384126 131 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 MIR876-201ENST00000401147 81 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 RNA5SP285-201ENST00000516619 119 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 MIR4460-201ENST00000577862 86 ntBASIC-0.11□□□□□ -2.43
NEK3P51956 SNORD101-201ENST00000384027 73 ntBASIC-0.12□□□□□ -2.43
NEK3P51956 AC109327.2-201ENST00000448339 378 ntBASIC-0.12□□□□□ -2.43
NEK3P51956 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.12□□□□□ -2.43
NEK3P51956 AC084368.1-201ENST00000620935 65 ntBASIC-0.12□□□□□ -2.43
NEK3P51956 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 AL161932.1-201ENST00000437408 146 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 RNU7-165P-201ENST00000458864 60 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 MIR3925-201ENST00000584674 77 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.13□□□□□ -2.43
NEK3P51956 RNU6-664P-201ENST00000362381 107 ntBASIC-0.14□□□□□ -2.43
NEK3P51956 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.14□□□□□ -2.43
NEK3P51956 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.14□□□□□ -2.43
NEK3P51956 MT-TY-201ENST00000387409 66 ntBASIC-0.14□□□□□ -2.43
NEK3P51956 RNU6-86P-201ENST00000606534 107 ntBASIC-0.14□□□□□ -2.43
NEK3P51956 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
NEK3P51956 RNU6-756P-201ENST00000383997 107 ntBASIC-0.15□□□□□ -2.43
NEK3P51956 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.15□□□□□ -2.43
NEK3P51956 RNU6-180P-201ENST00000516697 61 ntBASIC-0.15□□□□□ -2.43
NEK3P51956 YWHAEP2-201ENST00000580066 112 ntBASIC-0.15□□□□□ -2.43
NEK3P51956 uc_338.10-201ENST00000621872 182 ntBASIC-0.15□□□□□ -2.43
NEK3P51956 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.16□□□□□ -2.44
NEK3P51956 RNU6-813P-201ENST00000384691 107 ntBASIC-0.16□□□□□ -2.44
NEK3P51956 snoU13.11-201ENST00000459219 104 ntBASIC-0.16□□□□□ -2.44
NEK3P51956 CR383656.4-201ENST00000546909 122 ntBASIC-0.16□□□□□ -2.44
NEK3P51956 MIR4696-201ENST00000581431 70 ntBASIC-0.16□□□□□ -2.44
NEK3P51956 RNU6-834P-201ENST00000362367 110 ntBASIC-0.17□□□□□ -2.44
NEK3P51956 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
NEK3P51956 MIR516B1-201ENST00000385211 90 ntBASIC-0.17□□□□□ -2.44
NEK3P51956 RNA5SP163-201ENST00000410304 99 ntBASIC-0.17□□□□□ -2.44
NEK3P51956 RNU6-935P-201ENST00000410371 100 ntBASIC-0.17□□□□□ -2.44
NEK3P51956 RNU6-62P-201ENST00000516526 102 ntBASIC-0.17□□□□□ -2.44
NEK3P51956 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.17□□□□□ -2.44
NEK3P51956 MIR148A-201ENST00000362215 68 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 RNU6-644P-201ENST00000391155 98 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 MIR3613-201ENST00000579844 87 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 AC025521.1-201ENST00000621624 286 ntBASIC-0.18□□□□□ -2.44
NEK3P51956 RNU6-929P-201ENST00000384429 107 ntBASIC-0.19□□□□□ -2.44
NEK3P51956 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.19□□□□□ -2.44
NEK3P51956 RNU6-65P-201ENST00000516332 98 ntBASIC-0.19□□□□□ -2.44
NEK3P51956 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.2□□□□□ -2.44
NEK3P51956 RNU6-46P-201ENST00000383860 107 ntBASIC-0.2□□□□□ -2.44
NEK3P51956 RNU6-476P-201ENST00000384726 107 ntBASIC-0.2□□□□□ -2.44
NEK3P51956 AL513043.2-201ENST00000573941 143 ntBASIC-0.2□□□□□ -2.44
NEK3P51956 MIR6759-201ENST00000638110 65 ntBASIC-0.2□□□□□ -2.44
NEK3P51956 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms