Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
SOX18P35713 SNORD89-201ENST00000390981 114 ntBASIC1.58□□□□□ -2.16
SOX18P35713 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.58□□□□□ -2.16
SOX18P35713 RNA5SP327-201ENST00000362494 101 ntBASIC1.57□□□□□ -2.16
SOX18P35713 RNU6-1241P-201ENST00000384536 107 ntBASIC1.57□□□□□ -2.16
SOX18P35713 MIR942-201ENST00000401111 86 ntBASIC1.57□□□□□ -2.16
SOX18P35713 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
SOX18P35713 AL136317.1-201ENST00000612653 226 ntBASIC1.57□□□□□ -2.16
SOX18P35713 RNU6-824P-201ENST00000363724 104 ntBASIC1.56□□□□□ -2.16
SOX18P35713 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
SOX18P35713 RNU2-59P-201ENST00000410482 191 ntBASIC1.56□□□□□ -2.16
SOX18P35713 MIR2113-201ENST00000459007 91 ntBASIC1.56□□□□□ -2.16
SOX18P35713 RNU6-634P-201ENST00000459134 106 ntBASIC1.56□□□□□ -2.16
SOX18P35713 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.56□□□□□ -2.16
SOX18P35713 MIR4773-1-201ENST00000637203 78 ntBASIC1.56□□□□□ -2.16
SOX18P35713 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SOX18P35713 SNORA24B-201ENST00000384176 131 ntBASIC1.55□□□□□ -2.16
SOX18P35713 RNU6-1177P-201ENST00000391058 104 ntBASIC1.55□□□□□ -2.16
SOX18P35713 U6.81-201ENST00000612550 106 ntBASIC1.55□□□□□ -2.16
SOX18P35713 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SOX18P35713 RNA5SP403-201ENST00000363598 108 ntBASIC1.54□□□□□ -2.16
SOX18P35713 MIR489-201ENST00000384923 84 ntBASIC1.54□□□□□ -2.16
SOX18P35713 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
SOX18P35713 U3.27-201ENST00000391237 200 ntBASIC1.54□□□□□ -2.16
SOX18P35713 RNU4-62P-201ENST00000410125 130 ntBASIC1.54□□□□□ -2.16
SOX18P35713 Y_RNA.606-201ENST00000410579 103 ntBASIC1.54□□□□□ -2.16
SOX18P35713 RNU6-539P-201ENST00000516665 103 ntBASIC1.54□□□□□ -2.16
SOX18P35713 RNU7-161P-201ENST00000517289 62 ntBASIC1.54□□□□□ -2.16
SOX18P35713 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.54□□□□□ -2.16
SOX18P35713 MIR644A-201ENST00000385262 94 ntBASIC1.53□□□□□ -2.16
SOX18P35713 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SOX18P35713 snoU13.18-201ENST00000459483 104 ntBASIC1.53□□□□□ -2.16
SOX18P35713 RNU6-274P-201ENST00000459566 107 ntBASIC1.53□□□□□ -2.16
SOX18P35713 RNU6-469P-201ENST00000516253 101 ntBASIC1.53□□□□□ -2.16
SOX18P35713 MIR3675-201ENST00000583661 73 ntBASIC1.53□□□□□ -2.16
SOX18P35713 AL078603.1-201ENST00000603824 313 ntBASIC1.53□□□□□ -2.16
SOX18P35713 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SOX18P35713 RNU6-590P-201ENST00000365039 107 ntBASIC1.52□□□□□ -2.17
SOX18P35713 RNU6-1126P-201ENST00000384002 107 ntBASIC1.52□□□□□ -2.17
SOX18P35713 RNU6-649P-201ENST00000384463 107 ntBASIC1.52□□□□□ -2.17
SOX18P35713 SNORD30.1-201ENST00000391309 70 ntBASIC1.52□□□□□ -2.17
SOX18P35713 AC002350.1-201ENST00000490759 375 ntBASIC1.52□□□□□ -2.17
SOX18P35713 FABP5P4-201ENST00000437203 171 ntBASIC1.51□□□□□ -2.17
SOX18P35713 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
SOX18P35713 AC067863.3-201ENST00000624172 122 ntBASIC1.51□□□□□ -2.17
SOX18P35713 SNORD105-201ENST00000386910 85 ntBASIC1.5□□□□□ -2.17
SOX18P35713 MIR548L-201ENST00000408303 86 ntBASIC1.5□□□□□ -2.17
SOX18P35713 RNU1-123P-201ENST00000458950 160 ntBASIC1.5□□□□□ -2.17
SOX18P35713 RNU6-1110P-201ENST00000516462 101 ntBASIC1.5□□□□□ -2.17
SOX18P35713 MIR548AG2-201ENST00000581228 64 ntBASIC1.5□□□□□ -2.17
SOX18P35713 MIR3920-201ENST00000581751 86 ntBASIC1.5□□□□□ -2.17
SOX18P35713 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
SOX18P35713 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SOX18P35713 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SOX18P35713 RNU6-382P-201ENST00000365181 106 ntBASIC1.49□□□□□ -2.17
SOX18P35713 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
SOX18P35713 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
SOX18P35713 SNORD45.1-201ENST00000363181 77 ntBASIC1.47□□□□□ -2.17
SOX18P35713 Y_RNA.258-201ENST00000364613 105 ntBASIC1.47□□□□□ -2.17
SOX18P35713 SNORD115-31-201ENST00000365318 82 ntBASIC1.47□□□□□ -2.17
SOX18P35713 RNU6-540P-201ENST00000384622 101 ntBASIC1.47□□□□□ -2.17
SOX18P35713 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
SOX18P35713 RNU6-135P-201ENST00000516769 101 ntBASIC1.47□□□□□ -2.17
SOX18P35713 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SOX18P35713 SNORA7.1-201ENST00000363750 139 ntBASIC1.46□□□□□ -2.18
SOX18P35713 RNU6-895P-201ENST00000384125 103 ntBASIC1.46□□□□□ -2.18
SOX18P35713 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
SOX18P35713 MIR617-201ENST00000385030 97 ntBASIC1.46□□□□□ -2.18
SOX18P35713 MIR216B-201ENST00000390186 82 ntBASIC1.46□□□□□ -2.18
SOX18P35713 U7.7-201ENST00000459276 60 ntBASIC1.46□□□□□ -2.18
SOX18P35713 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.46□□□□□ -2.18
SOX18P35713 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
SOX18P35713 RNU6-663P-201ENST00000391105 106 ntBASIC1.45□□□□□ -2.18
SOX18P35713 AC244098.3-201ENST00000424803 96 ntBASIC1.45□□□□□ -2.18
SOX18P35713 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.45□□□□□ -2.18
SOX18P35713 AL691482.2-201ENST00000457453 84 ntBASIC1.45□□□□□ -2.18
SOX18P35713 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
SOX18P35713 SNORD124-201ENST00000459577 104 ntBASIC1.45□□□□□ -2.18
SOX18P35713 MIR4639-201ENST00000584938 69 ntBASIC1.45□□□□□ -2.18
SOX18P35713 AC244669.1-204ENST00000621564 178 ntBASIC1.45□□□□□ -2.18
SOX18P35713 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SOX18P35713 AC125388.1-201ENST00000459631 156 ntBASIC1.44□□□□□ -2.18
SOX18P35713 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
SOX18P35713 Y_RNA.340-201ENST00000365330 92 ntBASIC1.43□□□□□ -2.18
SOX18P35713 SNORD45A-201ENST00000384512 84 ntBASIC1.43□□□□□ -2.18
SOX18P35713 MIR519E-201ENST00000385075 84 ntBASIC1.43□□□□□ -2.18
SOX18P35713 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
SOX18P35713 MIR1276-201ENST00000408707 83 ntBASIC1.43□□□□□ -2.18
SOX18P35713 MIR6504-201ENST00000613520 61 ntBASIC1.43□□□□□ -2.18
SOX18P35713 SNORD28-201ENST00000384706 75 ntBASIC1.42□□□□□ -2.18
SOX18P35713 MIR19B1-201ENST00000384829 87 ntBASIC1.42□□□□□ -2.18
SOX18P35713 MIR200A-201ENST00000384875 90 ntBASIC1.42□□□□□ -2.18
SOX18P35713 RNU6-604P-201ENST00000390917 100 ntBASIC1.42□□□□□ -2.18
SOX18P35713 SNORD75.2-201ENST00000408784 58 ntBASIC1.42□□□□□ -2.18
SOX18P35713 RNU7-74P-201ENST00000459104 62 ntBASIC1.42□□□□□ -2.18
SOX18P35713 RNU6-752P-201ENST00000516376 102 ntBASIC1.42□□□□□ -2.18
SOX18P35713 MIR8053-201ENST00000613344 75 ntBASIC1.42□□□□□ -2.18
SOX18P35713 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SOX18P35713 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SOX18P35713 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 278.6 ms