Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.74□□□□□ -2.53
SEMA3DO95025 RNA5SP169-201ENST00000517268 117 ntBASIC-0.74□□□□□ -2.53
SEMA3DO95025 AC007012.1-201ENST00000567192 175 ntBASIC-0.74□□□□□ -2.53
SEMA3DO95025 AC130289.1-201ENST00000577321 73 ntBASIC-0.74□□□□□ -2.53
SEMA3DO95025 U4.1-201ENST00000620349 87 ntBASIC-0.74□□□□□ -2.53
SEMA3DO95025 RNU4-11P-201ENST00000365287 132 ntBASIC-0.75□□□□□ -2.53
SEMA3DO95025 RNU6-460P-201ENST00000391158 108 ntBASIC-0.75□□□□□ -2.53
SEMA3DO95025 MIR548G-201ENST00000408442 89 ntBASIC-0.75□□□□□ -2.53
SEMA3DO95025 AC244090.1-201ENST00000441884 93 ntBASIC-0.75□□□□□ -2.53
SEMA3DO95025 RNU6-90P-201ENST00000606352 106 ntBASIC-0.75□□□□□ -2.53
SEMA3DO95025 AC093726.3-201ENST00000637588 150 ntBASIC-0.75□□□□□ -2.53
SEMA3DO95025 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 MIR1468-201ENST00000410600 86 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 AL118496.2-201ENST00000448300 230 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 AL500527.2-201ENST00000454105 95 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 MIR378F-201ENST00000578143 78 ntBASIC-0.76□□□□□ -2.53
SEMA3DO95025 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 RNA5SP192-201ENST00000364404 120 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 RNU6-900P-201ENST00000384498 102 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 MIR759-201ENST00000390224 91 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 RN7SKP19-201ENST00000516016 252 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 AC072026.1-201ENST00000605023 201 ntBASIC-0.77□□□□□ -2.53
SEMA3DO95025 SNORD38.1-201ENST00000363863 68 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 RNU6-915P-201ENST00000364943 103 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 SNORD101-201ENST00000384027 73 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 RNU6-901P-201ENST00000384593 106 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 SNORD56B-201ENST00000384713 71 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 MIR1263-201ENST00000408324 86 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 AL353813.1-201ENST00000440700 253 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 RNU7-197P-201ENST00000458836 62 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 RNU6-158P-201ENST00000517104 100 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 MIR4696-201ENST00000581431 70 ntBASIC-0.78□□□□□ -2.53
SEMA3DO95025 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.79□□□□□ -2.54
SEMA3DO95025 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.79□□□□□ -2.54
SEMA3DO95025 SNORA49-201ENST00000386157 136 ntBASIC-0.79□□□□□ -2.54
SEMA3DO95025 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.79□□□□□ -2.54
SEMA3DO95025 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.79□□□□□ -2.54
SEMA3DO95025 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.79□□□□□ -2.54
SEMA3DO95025 RNU6-664P-201ENST00000362381 107 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 RNU6-363P-201ENST00000362895 105 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 MIR548D2-201ENST00000384955 97 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 MIR601-201ENST00000385256 79 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 AP002392.1-201ENST00000537692 208 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 AC145423.2-201ENST00000610631 239 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 MIR548O2-201ENST00000616090 70 ntBASIC-0.8□□□□□ -2.54
SEMA3DO95025 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 MIR204-201ENST00000385200 110 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
SEMA3DO95025 RNU6-466P-201ENST00000391224 103 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 snoU13.13-201ENST00000458842 104 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 RNU6-327P-201ENST00000516270 127 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 MIR4280-201ENST00000582178 76 ntBASIC-0.81□□□□□ -2.54
SEMA3DO95025 SNORD115-25-201ENST00000362619 82 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 SNORD114-25-201ENST00000363742 72 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 RNU6-151P-201ENST00000364158 107 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 RNU6-861P-201ENST00000516745 106 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 RNU6-762P-201ENST00000517107 102 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 MIR4499-201ENST00000584834 69 ntBASIC-0.82□□□□□ -2.54
SEMA3DO95025 RNU6-235P-201ENST00000362644 107 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 RNU6-409P-201ENST00000384114 104 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 RNU6-24P-201ENST00000384440 107 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 RNA5SP136-201ENST00000410906 107 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 SNORD38.3-201ENST00000516599 73 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 MIR4503-201ENST00000582187 83 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 U4.2-201ENST00000618561 85 ntBASIC-0.83□□□□□ -2.54
SEMA3DO95025 RNU6-647P-201ENST00000364243 107 ntBASIC-0.84□□□□□ -2.54
SEMA3DO95025 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.84□□□□□ -2.54
SEMA3DO95025 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.84□□□□□ -2.54
SEMA3DO95025 MIR216B-201ENST00000390186 82 ntBASIC-0.84□□□□□ -2.54
SEMA3DO95025 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.84□□□□□ -2.54
SEMA3DO95025 RNU6-86P-201ENST00000606534 107 ntBASIC-0.84□□□□□ -2.54
SEMA3DO95025 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 RNU6-54P-201ENST00000365563 107 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 MIR582-201ENST00000365731 98 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 RNU6-574P-201ENST00000384265 107 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 RNU6-935P-201ENST00000410371 100 ntBASIC-0.85□□□□□ -2.55
SEMA3DO95025 RNU7-55P-201ENST00000459426 62 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms