Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-630P-201ENST00000391258 106 ntBASIC1.99□□□□□ -2.09
HOXA2O43364 SNORA25.4-201ENST00000363666 124 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 SNORD115-22-201ENST00000364456 82 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 Y_RNA.258-201ENST00000364613 105 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 RNA5SP190-201ENST00000365222 118 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 RNU6-604P-201ENST00000390917 100 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA2O43364 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 RNU7-104P-201ENST00000459398 79 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
HOXA2O43364 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXA2O43364 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HOXA2O43364 Y_RNA.443-201ENST00000384135 111 ntBASIC1.97□□□□□ -2.09
HOXA2O43364 MIR222-201ENST00000384992 110 ntBASIC1.97□□□□□ -2.09
HOXA2O43364 RNU7-161P-201ENST00000517289 62 ntBASIC1.97□□□□□ -2.09
HOXA2O43364 MIR4255-201ENST00000579351 72 ntBASIC1.97□□□□□ -2.09
HOXA2O43364 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXA2O43364 RMST_2.1-201ENST00000617263 136 ntBASIC1.97□□□□□ -2.09
HOXA2O43364 RNU6-1216P-201ENST00000362590 107 ntBASIC1.96□□□□□ -2.1
HOXA2O43364 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HOXA2O43364 SNORD75.2-201ENST00000408784 58 ntBASIC1.96□□□□□ -2.1
HOXA2O43364 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXA2O43364 AL691482.2-201ENST00000457453 84 ntBASIC1.96□□□□□ -2.1
HOXA2O43364 MIR3920-201ENST00000581751 86 ntBASIC1.96□□□□□ -2.1
HOXA2O43364 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HOXA2O43364 MIR617-201ENST00000385030 97 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 SNORA67.5-201ENST00000391036 107 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 AC108667.1-201ENST00000428618 249 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 MIR4498-201ENST00000577599 66 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 MIR548AG2-201ENST00000581228 64 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
HOXA2O43364 SNORD113.1-201ENST00000363280 73 ntBASIC1.94□□□□□ -2.1
HOXA2O43364 RNA5SP247-201ENST00000411181 105 ntBASIC1.94□□□□□ -2.1
HOXA2O43364 RNU6-135P-201ENST00000516769 101 ntBASIC1.94□□□□□ -2.1
HOXA2O43364 RNU7-24P-201ENST00000458867 62 ntBASIC1.93□□□□□ -2.1
HOXA2O43364 SNORD13-201ENST00000459299 104 ntBASIC1.93□□□□□ -2.1
HOXA2O43364 AL136317.1-201ENST00000612653 226 ntBASIC1.93□□□□□ -2.1
HOXA2O43364 AC067863.3-201ENST00000624172 122 ntBASIC1.93□□□□□ -2.1
HOXA2O43364 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HOXA2O43364 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
HOXA2O43364 RNA5SP117-201ENST00000365294 118 ntBASIC1.92□□□□□ -2.1
HOXA2O43364 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
HOXA2O43364 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA2O43364 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
HOXA2O43364 MIR378A-201ENST00000362177 66 ntBASIC1.91□□□□□ -2.1
HOXA2O43364 RNU6-1053P-201ENST00000515930 101 ntBASIC1.91□□□□□ -2.1
HOXA2O43364 snoU13.31-201ENST00000607291 104 ntBASIC1.91□□□□□ -2.1
HOXA2O43364 SNORA17.3-201ENST00000391159 129 ntBASIC1.9□□□□□ -2.11
HOXA2O43364 RNU1-123P-201ENST00000458950 160 ntBASIC1.9□□□□□ -2.11
HOXA2O43364 RNU7-74P-201ENST00000459104 62 ntBASIC1.9□□□□□ -2.11
HOXA2O43364 RNU6-469P-201ENST00000516253 101 ntBASIC1.9□□□□□ -2.11
HOXA2O43364 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
HOXA2O43364 RNU6-495P-201ENST00000362995 107 ntBASIC1.89□□□□□ -2.11
HOXA2O43364 AC002429.1-201ENST00000437672 148 ntBASIC1.89□□□□□ -2.11
HOXA2O43364 MIR519E-201ENST00000385075 84 ntBASIC1.88□□□□□ -2.11
HOXA2O43364 AC002350.1-201ENST00000490759 375 ntBASIC1.88□□□□□ -2.11
HOXA2O43364 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
HOXA2O43364 MIR548O2-201ENST00000616090 70 ntBASIC1.88□□□□□ -2.11
HOXA2O43364 RNU6-1039P-201ENST00000383931 107 ntBASIC1.87□□□□□ -2.11
HOXA2O43364 SNORD116-24-201ENST00000384549 92 ntBASIC1.87□□□□□ -2.11
HOXA2O43364 RNU6-1110P-201ENST00000516462 101 ntBASIC1.86□□□□□ -2.11
HOXA2O43364 MIR4639-201ENST00000584938 69 ntBASIC1.86□□□□□ -2.11
HOXA2O43364 MIR6509-201ENST00000614603 85 ntBASIC1.86□□□□□ -2.11
HOXA2O43364 SNORA25-201ENST00000384384 134 ntBASIC1.85□□□□□ -2.11
HOXA2O43364 MIR644A-201ENST00000385262 94 ntBASIC1.85□□□□□ -2.11
HOXA2O43364 NAMPTP3-201ENST00000569273 224 ntBASIC1.85□□□□□ -2.11
HOXA2O43364 AC103706.3-201ENST00000636297 85 ntBASIC1.85□□□□□ -2.11
HOXA2O43364 SNORA7.1-201ENST00000363750 139 ntBASIC1.84□□□□□ -2.11
HOXA2O43364 SNORD89-201ENST00000390981 114 ntBASIC1.84□□□□□ -2.11
HOXA2O43364 MIR548L-201ENST00000408303 86 ntBASIC1.84□□□□□ -2.11
HOXA2O43364 FABP5P4-201ENST00000437203 171 ntBASIC1.84□□□□□ -2.11
HOXA2O43364 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
HOXA2O43364 AP000553.5-201ENST00000641933 54 ntBASIC1.84□□□□□ -2.11
HOXA2O43364 MTND4LP1-201ENST00000446263 157 ntBASIC1.83□□□□□ -2.12
HOXA2O43364 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
HOXA2O43364 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXA2O43364 RNU6-54P-201ENST00000365563 107 ntBASIC1.82□□□□□ -2.12
HOXA2O43364 SNORD105-201ENST00000386910 85 ntBASIC1.82□□□□□ -2.12
HOXA2O43364 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HOXA2O43364 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
HOXA2O43364 MIR4511-201ENST00000582784 87 ntBASIC1.82□□□□□ -2.12
HOXA2O43364 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXA2O43364 AC244669.1-204ENST00000621564 178 ntBASIC1.82□□□□□ -2.12
HOXA2O43364 Y_RNA.164-201ENST00000363709 102 ntBASIC1.81□□□□□ -2.12
HOXA2O43364 SNORD28-201ENST00000384706 75 ntBASIC1.81□□□□□ -2.12
HOXA2O43364 MIR9-2-201ENST00000384838 87 ntBASIC1.81□□□□□ -2.12
HOXA2O43364 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
HOXA2O43364 SNORD41.1-201ENST00000391000 69 ntBASIC1.8□□□□□ -2.12
HOXA2O43364 AP1B1P2-201ENST00000416196 106 ntBASIC1.8□□□□□ -2.12
HOXA2O43364 RPS29P23-201ENST00000458635 123 ntBASIC1.8□□□□□ -2.12
HOXA2O43364 U7.7-201ENST00000459276 60 ntBASIC1.8□□□□□ -2.12
HOXA2O43364 AC069503.3-201ENST00000618674 145 ntBASIC1.8□□□□□ -2.12
HOXA2O43364 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HOXA2O43364 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXA2O43364 RNU6V-201ENST00000384105 107 ntBASIC1.79□□□□□ -2.12
HOXA2O43364 RNU6-982P-201ENST00000516216 102 ntBASIC1.79□□□□□ -2.12
HOXA2O43364 MIR4303-201ENST00000581299 66 ntBASIC1.79□□□□□ -2.12
HOXA2O43364 AC073869.9-201ENST00000641610 120 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 905.4 ms