Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 SNORA24B-201ENST00000384176 131 ntBASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HRH3Q9Y5N1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.88□□□□□ -2.11
HRH3Q9Y5N1 RNU6-910P-201ENST00000390844 107 ntBASIC1.88□□□□□ -2.11
HRH3Q9Y5N1 AC244505.6-201ENST00000452829 130 ntBASIC1.88□□□□□ -2.11
HRH3Q9Y5N1 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
HRH3Q9Y5N1 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
HRH3Q9Y5N1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HRH3Q9Y5N1 RNA5SP245-201ENST00000364239 121 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 RNU6-895P-201ENST00000384125 103 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 RNU6-663P-201ENST00000391105 106 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 RNU6-902P-201ENST00000517212 91 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 MIR4804-201ENST00000581683 73 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 AL359821.1-201ENST00000605519 182 ntBASIC1.87□□□□□ -2.11
HRH3Q9Y5N1 RNU6-330P-201ENST00000363015 107 ntBASIC1.86□□□□□ -2.11
HRH3Q9Y5N1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.86□□□□□ -2.11
HRH3Q9Y5N1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HRH3Q9Y5N1 RNU7-13P-201ENST00000516413 62 ntBASIC1.86□□□□□ -2.11
HRH3Q9Y5N1 MIR8053-201ENST00000613344 75 ntBASIC1.86□□□□□ -2.11
HRH3Q9Y5N1 AL353997.5-201ENST00000618886 171 ntBASIC1.86□□□□□ -2.11
HRH3Q9Y5N1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 RNU6-540P-201ENST00000384622 101 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 RNU6-274P-201ENST00000459566 107 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 RNU6-287P-201ENST00000516230 98 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 RNU6-295P-201ENST00000516901 104 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 U6.81-201ENST00000612550 106 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 U6.111-201ENST00000636093 83 ntBASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HRH3Q9Y5N1 MIR520F-201ENST00000384824 87 ntBASIC1.84□□□□□ -2.11
HRH3Q9Y5N1 MIR216B-201ENST00000390186 82 ntBASIC1.84□□□□□ -2.11
HRH3Q9Y5N1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.84□□□□□ -2.11
HRH3Q9Y5N1 RNU7-56P-201ENST00000458744 62 ntBASIC1.84□□□□□ -2.11
HRH3Q9Y5N1 AL157834.3-201ENST00000615543 103 ntBASIC1.84□□□□□ -2.11
HRH3Q9Y5N1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.12
HRH3Q9Y5N1 RNU6-800P-201ENST00000384473 103 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 SNORA26.9-201ENST00000391322 122 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 SUMO2P12-201ENST00000405924 140 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 AC003989.2-201ENST00000440224 169 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 SNORA70.22-201ENST00000517160 124 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.83□□□□□ -2.12
HRH3Q9Y5N1 Y_RNA.205-201ENST00000364128 113 ntBASIC1.82□□□□□ -2.12
HRH3Q9Y5N1 SNORD79.1-201ENST00000516069 84 ntBASIC1.82□□□□□ -2.12
HRH3Q9Y5N1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HRH3Q9Y5N1 MIR4773-1-201ENST00000637203 78 ntBASIC1.82□□□□□ -2.12
HRH3Q9Y5N1 SNORD45.1-201ENST00000363181 77 ntBASIC1.81□□□□□ -2.12
HRH3Q9Y5N1 RNU6-824P-201ENST00000363724 104 ntBASIC1.81□□□□□ -2.12
HRH3Q9Y5N1 SNORD115-31-201ENST00000365318 82 ntBASIC1.81□□□□□ -2.12
HRH3Q9Y5N1 RNU6-752P-201ENST00000516376 102 ntBASIC1.81□□□□□ -2.12
HRH3Q9Y5N1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.81□□□□□ -2.12
HRH3Q9Y5N1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HRH3Q9Y5N1 SNORD115-24-201ENST00000363528 82 ntBASIC1.8□□□□□ -2.12
HRH3Q9Y5N1 AC093423.1-201ENST00000440817 142 ntBASIC1.8□□□□□ -2.12
HRH3Q9Y5N1 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
HRH3Q9Y5N1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HRH3Q9Y5N1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HRH3Q9Y5N1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 MIR222-201ENST00000384992 110 ntBASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HRH3Q9Y5N1 ZNF355P-201ENST00000427301 3216 ntBASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 SNORD12-201ENST00000391002 90 ntBASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 SNORA31.14-201ENST00000516728 116 ntBASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 AL078603.1-201ENST00000603824 313 ntBASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.78□□□□□ -2.12
HRH3Q9Y5N1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 RNU6-369P-201ENST00000362515 102 ntBASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 MIR9-2-201ENST00000384838 87 ntBASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 MIR2113-201ENST00000459007 91 ntBASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 AL136317.1-201ENST00000612653 226 ntBASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 uc_338.16-201ENST00000621804 95 ntBASIC1.77□□□□□ -2.13
HRH3Q9Y5N1 MIR337-201ENST00000362281 93 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 RNA5SP117-201ENST00000365294 118 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 MTND4LP19-201ENST00000403051 166 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 MIR1827-201ENST00000408549 66 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 RNU6-881P-201ENST00000516813 102 ntBASIC1.76□□□□□ -2.13
HRH3Q9Y5N1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
HRH3Q9Y5N1 MIR583-201ENST00000384846 75 ntBASIC1.75□□□□□ -2.13
HRH3Q9Y5N1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.75□□□□□ -2.13
HRH3Q9Y5N1 AC244098.3-201ENST00000424803 96 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms