Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 MIR1255B1-201ENST00000636325 63 ntBASIC-1.02□□□□□ -2.57
CCDC59Q9P031 SNORD115-25-201ENST00000362619 82 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 SNORD95.1-201ENST00000364099 68 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 RNU6-239P-201ENST00000390990 99 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 snoU13.13-201ENST00000458842 104 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 AC021146.6-201ENST00000514659 117 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 AL117187.1-201ENST00000555482 181 ntBASIC-1.03□□□□□ -2.57
CCDC59Q9P031 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 SNORA49-201ENST00000386157 136 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 MIR196A1-201ENST00000388006 70 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 SNORA7.5-201ENST00000410672 110 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 U4.1-201ENST00000620349 87 ntBASIC-1.04□□□□□ -2.58
CCDC59Q9P031 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 MIR216B-201ENST00000390186 82 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 RNU7-55P-201ENST00000459426 62 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 AL117351.2-201ENST00000513571 157 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 SNORD38.3-201ENST00000516599 73 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 IGKV1-22-201ENST00000524313 326 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 RNU6-90P-201ENST00000606352 106 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 AC145423.2-201ENST00000610631 239 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 MIR548O2-201ENST00000616090 70 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 AL512310.12-203ENST00000640543 90 ntBASIC-1.05□□□□□ -2.58
CCDC59Q9P031 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 SNORD101-201ENST00000384027 73 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 MIR548G-201ENST00000408442 89 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 RNU7-121P-201ENST00000516604 62 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 MIR6851-201ENST00000617060 67 ntBASIC-1.06□□□□□ -2.58
CCDC59Q9P031 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.07□□□□□ -2.58
CCDC59Q9P031 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.07□□□□□ -2.58
CCDC59Q9P031 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.07□□□□□ -2.58
CCDC59Q9P031 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.07□□□□□ -2.58
CCDC59Q9P031 SNORA40.17-201ENST00000517256 115 ntBASIC-1.07□□□□□ -2.58
CCDC59Q9P031 RNU6-86P-201ENST00000606534 107 ntBASIC-1.07□□□□□ -2.58
CCDC59Q9P031 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 RNU6-797P-201ENST00000363101 109 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 SNORD38.1-201ENST00000363863 68 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 RNU6-466P-201ENST00000391224 103 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 MIR4696-201ENST00000581431 70 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 MIR3128-201ENST00000581957 66 ntBASIC-1.08□□□□□ -2.58
CCDC59Q9P031 RNU6-664P-201ENST00000362381 107 ntBASIC-1.09□□□□□ -2.58
CCDC59Q9P031 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.09□□□□□ -2.58
CCDC59Q9P031 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.09□□□□□ -2.58
CCDC59Q9P031 MIR759-201ENST00000390224 91 ntBASIC-1.09□□□□□ -2.58
CCDC59Q9P031 AC008737.2-201ENST00000599446 118 ntBASIC-1.09□□□□□ -2.58
CCDC59Q9P031 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 SNORD83B-201ENST00000386745 93 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 MIR1265-201ENST00000408444 86 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 SNORA13-201ENST00000458790 133 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 SNORD2-201ENST00000459163 69 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 RNU6-111P-201ENST00000517179 105 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 AC022559.1-201ENST00000520905 205 ntBASIC-1.1□□□□□ -2.59
CCDC59Q9P031 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.1□□□□□ -2.59
CCDC59Q9P031 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.11□□□□□ -2.59
CCDC59Q9P031 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.11□□□□□ -2.59
CCDC59Q9P031 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.11□□□□□ -2.59
CCDC59Q9P031 RNA5SP25-201ENST00000410815 110 ntBASIC-1.11□□□□□ -2.59
CCDC59Q9P031 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.11□□□□□ -2.59
CCDC59Q9P031 MIR3121-201ENST00000579680 77 ntBASIC-1.11□□□□□ -2.59
CCDC59Q9P031 RNU6-235P-201ENST00000362644 107 ntBASIC-1.12□□□□□ -2.59
CCDC59Q9P031 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.12□□□□□ -2.59
CCDC59Q9P031 MIR606-201ENST00000384851 96 ntBASIC-1.12□□□□□ -2.59
CCDC59Q9P031 RNU6-935P-201ENST00000410371 100 ntBASIC-1.12□□□□□ -2.59
CCDC59Q9P031 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.12□□□□□ -2.59
CCDC59Q9P031 RNU6-762P-201ENST00000517107 102 ntBASIC-1.12□□□□□ -2.59
CCDC59Q9P031 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 RNU6-973P-201ENST00000364690 107 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 snoU13.11-201ENST00000459219 104 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 RNU6-881P-201ENST00000516813 102 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 AP002392.1-201ENST00000537692 208 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 AP001094.1-201ENST00000579805 193 ntBASIC-1.13□□□□□ -2.59
CCDC59Q9P031 RNU6-363P-201ENST00000362895 105 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 RNU6-54P-201ENST00000365563 107 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 MIR582-201ENST00000365731 98 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 AL353813.1-201ENST00000440700 253 ntBASIC-1.14□□□□□ -2.59
CCDC59Q9P031 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 687.2 ms