Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 AC023934.1-201ENST00000574529 2389 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 MIR4781-201ENST00000585250 76 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 AC005520.4-201ENST00000604337 90 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 AL359821.1-201ENST00000605519 182 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 MIR6082-201ENST00000613604 109 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 RNU6-824P-201ENST00000363724 104 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 SNORD101-201ENST00000384027 73 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 RNU6-321P-201ENST00000410912 106 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 MIR548H5-201ENST00000580314 60 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.52□□□□□ -2.17
SMPD4Q9NXE4 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 SNORA7.1-201ENST00000363750 139 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 RNU6-471P-201ENST00000383944 106 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 SNORD45A-201ENST00000384512 84 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 Y_RNA.606-201ENST00000410579 103 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 RNU6-165P-201ENST00000517170 99 ntBASIC1.51□□□□□ -2.17
SMPD4Q9NXE4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 RNA5SP245-201ENST00000364239 121 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 MIR9-2-201ENST00000384838 87 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 RNU6-719P-201ENST00000516671 104 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 U6.81-201ENST00000612550 106 ntBASIC1.5□□□□□ -2.17
SMPD4Q9NXE4 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 MIR1257-201ENST00000408490 117 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 AC097635.1-201ENST00000450678 155 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 AL157834.3-201ENST00000615543 103 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
SMPD4Q9NXE4 SNORD115-22-201ENST00000364456 82 ntBASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 MIR599-201ENST00000385069 95 ntBASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 MIR3675-201ENST00000583661 73 ntBASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 RNU7-10P-201ENST00000607194 63 ntBASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SMPD4Q9NXE4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 RNY4P3-201ENST00000365254 95 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 MIR451A-201ENST00000385059 72 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 RNU6-630P-201ENST00000391258 106 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 RNU6-765P-201ENST00000516916 99 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.47□□□□□ -2.17
SMPD4Q9NXE4 SNORD1A-201ENST00000364968 72 ntBASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 SNORD116-24-201ENST00000384549 92 ntBASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 MIR125B2-201ENST00000385128 89 ntBASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 RNU6-935P-201ENST00000410371 100 ntBASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 AC097510.1-201ENST00000510945 133 ntBASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SMPD4Q9NXE4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 SNORD45.1-201ENST00000363181 77 ntBASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 RNU6-934P-201ENST00000365154 107 ntBASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 MIR4771-2-201ENST00000577758 74 ntBASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 MIR4771-1-201ENST00000582617 74 ntBASIC1.45□□□□□ -2.18
SMPD4Q9NXE4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.44□□□□□ -2.18
SMPD4Q9NXE4 Y_RNA.443-201ENST00000384135 111 ntBASIC1.44□□□□□ -2.18
SMPD4Q9NXE4 SNORA75.2-201ENST00000391138 150 ntBASIC1.44□□□□□ -2.18
SMPD4Q9NXE4 SNORA75.3-201ENST00000391231 150 ntBASIC1.44□□□□□ -2.18
SMPD4Q9NXE4 MIR3664-201ENST00000579074 99 ntBASIC1.44□□□□□ -2.18
SMPD4Q9NXE4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 RNU6-369P-201ENST00000362515 102 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 RNU6-681P-201ENST00000364012 104 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 SNORD113.3-201ENST00000364630 78 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 RNU6-604P-201ENST00000390917 100 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 RNU7-40P-201ENST00000516397 64 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 RNU6-881P-201ENST00000516813 102 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 AC138907.6-201ENST00000568401 126 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 AC138869.1-201ENST00000568623 124 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
SMPD4Q9NXE4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 SNORD113.1-201ENST00000363280 73 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 RNU6-382P-201ENST00000365181 106 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 RNU6-895P-201ENST00000384125 103 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 RNU6-535P-201ENST00000384722 107 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 AL109933.3-201ENST00000619095 188 ntBASIC1.42□□□□□ -2.18
SMPD4Q9NXE4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SMPD4Q9NXE4 SNORA25.4-201ENST00000363666 124 ntBASIC1.41□□□□□ -2.18
SMPD4Q9NXE4 RNU6-1177P-201ENST00000391058 104 ntBASIC1.41□□□□□ -2.18
SMPD4Q9NXE4 MTND4LP19-201ENST00000403051 166 ntBASIC1.41□□□□□ -2.18
SMPD4Q9NXE4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms