Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SNORA75.3-201ENST00000391231 150 ntBASIC3.23□□□□□ -1.89
RNF39Q9H2S5 RNA5SP270-201ENST00000411361 118 ntBASIC3.23□□□□□ -1.89
RNF39Q9H2S5 RNA5SP217-201ENST00000515959 91 ntBASIC3.23□□□□□ -1.89
RNF39Q9H2S5 SNORA44.1-201ENST00000517031 108 ntBASIC3.23□□□□□ -1.89
RNF39Q9H2S5 MIR4473-201ENST00000583731 91 ntBASIC3.23□□□□□ -1.89
RNF39Q9H2S5 U7.8-201ENST00000619968 63 ntBASIC3.23□□□□□ -1.89
RNF39Q9H2S5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF39Q9H2S5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF39Q9H2S5 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
RNF39Q9H2S5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RNF39Q9H2S5 SNORD63.2-201ENST00000516303 64 ntBASIC3.22□□□□□ -1.89
RNF39Q9H2S5 SNORA64.4-201ENST00000516632 81 ntBASIC3.22□□□□□ -1.89
RNF39Q9H2S5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC3.22□□□□□ -1.89
RNF39Q9H2S5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF39Q9H2S5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF39Q9H2S5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF39Q9H2S5 MIR1-1-201ENST00000362147 71 ntBASIC3.21□□□□□ -1.9
RNF39Q9H2S5 AL354695.1-201ENST00000427935 228 ntBASIC3.21□□□□□ -1.9
RNF39Q9H2S5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RNF39Q9H2S5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF39Q9H2S5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF39Q9H2S5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF39Q9H2S5 AL159169.1-201ENST00000421119 127 ntBASIC3.2□□□□□ -1.9
RNF39Q9H2S5 RN7SL429P-201ENST00000479090 223 ntBASIC3.2□□□□□ -1.9
RNF39Q9H2S5 RN7SL489P-201ENST00000486185 223 ntBASIC3.2□□□□□ -1.9
RNF39Q9H2S5 RN7SL327P-201ENST00000488659 223 ntBASIC3.2□□□□□ -1.9
RNF39Q9H2S5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF39Q9H2S5 RN7SL853P-201ENST00000617250 223 ntBASIC3.2□□□□□ -1.9
RNF39Q9H2S5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RNF39Q9H2S5 Y_RNA.321-201ENST00000365149 102 ntBASIC3.19□□□□□ -1.9
RNF39Q9H2S5 RNU6-337P-201ENST00000391243 106 ntBASIC3.19□□□□□ -1.9
RNF39Q9H2S5 MIR548T-201ENST00000408369 74 ntBASIC3.19□□□□□ -1.9
RNF39Q9H2S5 RNU7-170P-201ENST00000459303 61 ntBASIC3.19□□□□□ -1.9
RNF39Q9H2S5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF39Q9H2S5 RNA5SP402-201ENST00000517148 110 ntBASIC3.19□□□□□ -1.9
RNF39Q9H2S5 RNU6-301P-201ENST00000384277 107 ntBASIC3.18□□□□□ -1.9
RNF39Q9H2S5 AC002350.1-201ENST00000490759 375 ntBASIC3.18□□□□□ -1.9
RNF39Q9H2S5 SNORA77B-201ENST00000578179 125 ntBASIC3.18□□□□□ -1.9
RNF39Q9H2S5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF39Q9H2S5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF39Q9H2S5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RNF39Q9H2S5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF39Q9H2S5 MTRNR2L9-201ENST00000622562 75 ntBASIC3.17□□□□□ -1.9
RNF39Q9H2S5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RNF39Q9H2S5 SNORD6-201ENST00000365444 73 ntBASIC3.16□□□□□ -1.9
RNF39Q9H2S5 AC079600.2-201ENST00000550076 130 ntBASIC3.16□□□□□ -1.9
RNF39Q9H2S5 AC025627.3-201ENST00000582078 182 ntBASIC3.16□□□□□ -1.9
RNF39Q9H2S5 Y_RNA.363-201ENST00000365529 113 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 RNU4-62P-201ENST00000410125 130 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF39Q9H2S5 AC108938.1-201ENST00000451204 136 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 RNA5SP356-201ENST00000515972 94 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 RNA5SP47-201ENST00000517230 109 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 MIR5047-201ENST00000579212 100 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 MIR4672-201ENST00000583126 81 ntBASIC3.15□□□□□ -1.91
RNF39Q9H2S5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF39Q9H2S5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF39Q9H2S5 SNORA6-201ENST00000384033 151 ntBASIC3.14□□□□□ -1.91
RNF39Q9H2S5 SUMO1P4-201ENST00000429430 302 ntBASIC3.14□□□□□ -1.91
RNF39Q9H2S5 MIR6773-201ENST00000612812 74 ntBASIC3.14□□□□□ -1.91
RNF39Q9H2S5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF39Q9H2S5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RNF39Q9H2S5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF39Q9H2S5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF39Q9H2S5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF39Q9H2S5 AC009487.2-201ENST00000420969 6821 ntBASIC3.13□□□□□ -1.91
RNF39Q9H2S5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RNF39Q9H2S5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF39Q9H2S5 RNU6-851P-201ENST00000384565 107 ntBASIC3.13□□□□□ -1.91
RNF39Q9H2S5 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
RNF39Q9H2S5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF39Q9H2S5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF39Q9H2S5 SNORD57-201ENST00000448188 72 ntBASIC3.12□□□□□ -1.91
RNF39Q9H2S5 RNU6-165P-201ENST00000517170 99 ntBASIC3.12□□□□□ -1.91
RNF39Q9H2S5 MIR8063-201ENST00000621930 81 ntBASIC3.12□□□□□ -1.91
RNF39Q9H2S5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF39Q9H2S5 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 AC006210.1-201ENST00000424882 111 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 AC048334.1-201ENST00000477975 159 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF39Q9H2S5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 AL162376.1-201ENST00000624117 175 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 MIR4426-201ENST00000640330 63 ntBASIC3.11□□□□□ -1.91
RNF39Q9H2S5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF39Q9H2S5 SNORD18A-201ENST00000363753 72 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 RNU6-1091P-201ENST00000363945 107 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 AC087499.2-201ENST00000432861 149 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 AC244090.1-201ENST00000441884 93 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 SNORD2-201ENST00000459163 69 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 MIR4319-201ENST00000577285 85 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 MIR3186-201ENST00000577404 85 ntBASIC3.1□□□□□ -1.91
RNF39Q9H2S5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF39Q9H2S5 MIR449A-201ENST00000362113 91 ntBASIC3.09□□□□□ -1.91
RNF39Q9H2S5 RNU1-112P-201ENST00000364401 164 ntBASIC3.09□□□□□ -1.91
RNF39Q9H2S5 MIR4529-201ENST00000578110 78 ntBASIC3.09□□□□□ -1.91
RNF39Q9H2S5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF39Q9H2S5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RNF39Q9H2S5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RNF39Q9H2S5 AL591704.2-201ENST00000421658 181 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms