Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SNORA63.6-201ENST00000364921 119 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 SNORD81.2-201ENST00000365153 76 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 RNU6-80P-201ENST00000384195 107 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 RNU6-243P-201ENST00000391140 107 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 RNU6-400P-201ENST00000391173 106 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 AC018880.2-201ENST00000414265 201 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 SNORD42B-201ENST00000458893 67 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 RNU6-980P-201ENST00000516925 103 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.84□□□□□ -2.7
TRIM4Q9C037 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 RNU6-290P-201ENST00000365212 101 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 SNORD115-46-201ENST00000390982 71 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 SNORD77B-201ENST00000391112 67 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 RNU6-559P-201ENST00000516151 98 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 MIR3908-201ENST00000579798 126 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 MIR4490-201ENST00000582647 84 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 AC009779.6-201ENST00000603972 165 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 AC103591.3-201ENST00000608684 209 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 AC104985.2-201ENST00000620598 500 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 U6.96-201ENST00000636425 70 ntBASIC-1.85□□□□□ -2.71
TRIM4Q9C037 RNU6-845P-201ENST00000362578 103 ntBASIC-1.86□□□□□ -2.71
TRIM4Q9C037 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.86□□□□□ -2.71
TRIM4Q9C037 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.86□□□□□ -2.71
TRIM4Q9C037 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.86□□□□□ -2.71
TRIM4Q9C037 SNORD116-25-201ENST00000516517 92 ntBASIC-1.86□□□□□ -2.71
TRIM4Q9C037 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.86□□□□□ -2.71
TRIM4Q9C037 RNU6-978P-201ENST00000364371 103 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 RNU6-728P-201ENST00000365375 104 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 RNU6-326P-201ENST00000365480 107 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 MTND1P29-201ENST00000448112 647 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 AC037487.3-201ENST00000606668 112 ntBASIC-1.87□□□□□ -2.71
TRIM4Q9C037 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
TRIM4Q9C037 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.88□□□□□ -2.71
TRIM4Q9C037 RNU6-194P-201ENST00000363862 105 ntBASIC-1.88□□□□□ -2.71
TRIM4Q9C037 SNORD101-201ENST00000384027 73 ntBASIC-1.88□□□□□ -2.71
TRIM4Q9C037 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.88□□□□□ -2.71
TRIM4Q9C037 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.88□□□□□ -2.71
TRIM4Q9C037 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.88□□□□□ -2.71
TRIM4Q9C037 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.88□□□□□ -2.71
TRIM4Q9C037 MIR5683-201ENST00000636514 76 ntBASIC-1.88□□□□□ -2.71
TRIM4Q9C037 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 RNU6-690P-201ENST00000365242 106 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 RNU4-43P-201ENST00000410628 137 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 MIR3139-201ENST00000579145 76 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 AC025253.1-201ENST00000613623 543 ntBASIC-1.89□□□□□ -2.71
TRIM4Q9C037 SNORD36A-201ENST00000362874 73 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 RNU1-115P-201ENST00000365329 160 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 SNORD38.2-201ENST00000384470 69 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 RNU6-935P-201ENST00000410371 100 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 AC002553.4-201ENST00000616896 331 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.9□□□□□ -2.71
TRIM4Q9C037 RNU6-957P-201ENST00000363652 99 ntBASIC-1.91□□□□□ -2.72
TRIM4Q9C037 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.91□□□□□ -2.72
TRIM4Q9C037 RNU6-647P-201ENST00000364243 107 ntBASIC-1.91□□□□□ -2.72
TRIM4Q9C037 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.91□□□□□ -2.72
TRIM4Q9C037 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.91□□□□□ -2.72
TRIM4Q9C037 MTND4LP32-201ENST00000636111 270 ntBASIC-1.91□□□□□ -2.72
TRIM4Q9C037 UBE2WP1-201ENST00000362030 340 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 RNU6-664P-201ENST00000362381 107 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 RNU6-990P-201ENST00000364385 104 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 MT-TM-201ENST00000387377 68 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 RNU7-88P-201ENST00000458752 63 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 MIR4696-201ENST00000581431 70 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 U4.5-201ENST00000617137 123 ntBASIC-1.92□□□□□ -2.72
TRIM4Q9C037 RNA5SP405-201ENST00000363059 114 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 SNORD116-1-201ENST00000384335 95 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 MIR34C-201ENST00000384831 77 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 AC113139.1-201ENST00000605049 239 ntBASIC-1.93□□□□□ -2.72
TRIM4Q9C037 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.94□□□□□ -2.72
TRIM4Q9C037 RNU6-695P-201ENST00000391157 104 ntBASIC-1.94□□□□□ -2.72
TRIM4Q9C037 SNORD19-201ENST00000391191 68 ntBASIC-1.94□□□□□ -2.72
TRIM4Q9C037 MIR1255B2-201ENST00000408618 67 ntBASIC-1.94□□□□□ -2.72
TRIM4Q9C037 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.94□□□□□ -2.72
TRIM4Q9C037 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.94□□□□□ -2.72
TRIM4Q9C037 RNU6-79P-201ENST00000362511 107 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 U3.27-201ENST00000391237 200 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 MIR1277-201ENST00000408536 78 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 AC069439.1-201ENST00000494739 167 ntBASIC-1.95□□□□□ -2.72
TRIM4Q9C037 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.95□□□□□ -2.72
TRIM4Q9C037 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms