Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC024614.3-201ENST00000637860 256 ntBASIC-4.6□□□□□ -3.15
VPS13AQ96RL7 RNU6-755P-201ENST00000364400 103 ntBASIC-4.6□□□□□ -3.15
VPS13AQ96RL7 AC092794.1-201ENST00000612734 582 ntBASIC-4.6□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.61□□□□□ -3.15
VPS13AQ96RL7 RNU6-172P-201ENST00000411000 93 ntBASIC-4.61□□□□□ -3.15
VPS13AQ96RL7 SNORA40.9-201ENST00000515895 93 ntBASIC-4.61□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.310-201ENST00000365063 113 ntBASIC-4.61□□□□□ -3.15
VPS13AQ96RL7 SNORA72.4-201ENST00000384174 132 ntBASIC-4.61□□□□□ -3.15
VPS13AQ96RL7 AP001506.1-201ENST00000615444 211 ntBASIC-4.61□□□□□ -3.15
VPS13AQ96RL7 MIR548I1-201ENST00000408810 149 ntBASIC-4.62□□□□□ -3.15
VPS13AQ96RL7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-4.62□□□□□ -3.15
VPS13AQ96RL7 RNU7-51P-201ENST00000516560 62 ntBASIC-4.62□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 SNORD77.4-201ENST00000516158 81 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 AC005357.1-201ENST00000588399 301 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 RNU6-151P-201ENST00000364158 107 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 RNU6-1145P-201ENST00000384246 107 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.465-201ENST00000384293 102 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.474-201ENST00000384341 102 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 SNORA19.3-201ENST00000516165 130 ntBASIC-4.63□□□□□ -3.15
VPS13AQ96RL7 AC019226.2-201ENST00000625973 424 ntBASIC-4.64□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.560-201ENST00000384689 102 ntBASIC-4.64□□□□□ -3.15
VPS13AQ96RL7 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.64□□□□□ -3.15
VPS13AQ96RL7 MIR3064-201ENST00000581130 66 ntBASIC-4.64□□□□□ -3.15
VPS13AQ96RL7 SCARNA15-202ENST00000516881 127 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 RNU6-85P-201ENST00000605989 107 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 RNU5F-1-201ENST00000362507 117 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 RNU6-281P-201ENST00000384212 103 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 RNU6-1122P-201ENST00000384449 107 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 MTND2P20-201ENST00000440805 661 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 RNU6-752P-201ENST00000516376 102 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 AC090971.5-201ENST00000621102 293 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 SNORA79-201ENST00000408376 140 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 RNU6-625P-201ENST00000459412 107 ntBASIC-4.65□□□□□ -3.15
VPS13AQ96RL7 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 RNU6-1219P-201ENST00000516143 112 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MIR4666A-201ENST00000580160 79 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 Z99129.1-201ENST00000612510 255 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MIR1244-1-201ENST00000612829 85 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MIR1244-3-201ENST00000635744 85 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MIR1244-2-201ENST00000636449 85 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MIR1244-4-202ENST00000636813 85 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 SNORD50.2-201ENST00000365465 70 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MTND3P23-201ENST00000431980 347 ntBASIC-4.66□□□□□ -3.16
VPS13AQ96RL7 MIR421-201ENST00000365696 85 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 MTCO2P4-201ENST00000517968 247 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 AC025166.1-201ENST00000612411 163 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 RNU6-742P-201ENST00000365289 107 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 MTCYBP36-201ENST00000404146 440 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 Y_RNA.64-201ENST00000362845 102 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 RNU7-175P-201ENST00000515915 61 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 HULC.1-201ENST00000612720 240 ntBASIC-4.67□□□□□ -3.16
VPS13AQ96RL7 Y_RNA.83-201ENST00000363005 113 ntBASIC-4.68□□□□□ -3.16
VPS13AQ96RL7 AC025521.1-201ENST00000621624 286 ntBASIC-4.68□□□□□ -3.16
VPS13AQ96RL7 RNU6-933P-201ENST00000384424 107 ntBASIC-4.68□□□□□ -3.16
VPS13AQ96RL7 RNU6-792P-201ENST00000363490 107 ntBASIC-4.69□□□□□ -3.16
VPS13AQ96RL7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-4.69□□□□□ -3.16
VPS13AQ96RL7 RNU4-11P-201ENST00000365287 132 ntBASIC-4.69□□□□□ -3.16
VPS13AQ96RL7 SNORD115.2-201ENST00000391126 59 ntBASIC-4.69□□□□□ -3.16
VPS13AQ96RL7 MIR3912-201ENST00000577566 105 ntBASIC-4.69□□□□□ -3.16
VPS13AQ96RL7 MIR3144-201ENST00000579460 79 ntBASIC-4.69□□□□□ -3.16
VPS13AQ96RL7 RNA5SP292-201ENST00000390974 118 ntBASIC-4.7□□□□□ -3.16
VPS13AQ96RL7 AL512310.12-203ENST00000640543 90 ntBASIC-4.7□□□□□ -3.16
VPS13AQ96RL7 AC064836.2-201ENST00000609491 462 ntBASIC-4.71□□□□□ -3.16
VPS13AQ96RL7 U6.104-201ENST00000637979 90 ntBASIC-4.71□□□□□ -3.16
VPS13AQ96RL7 RNU6-1016P-201ENST00000516689 94 ntBASIC-4.71□□□□□ -3.16
VPS13AQ96RL7 MIR4317-201ENST00000637586 65 ntBASIC-4.71□□□□□ -3.16
VPS13AQ96RL7 MTND4LP1-201ENST00000446263 157 ntBASIC-4.71□□□□□ -3.16
VPS13AQ96RL7 RNU6-353P-201ENST00000364266 108 ntBASIC-4.72□□□□□ -3.16
VPS13AQ96RL7 RNU6-434P-201ENST00000384376 107 ntBASIC-4.72□□□□□ -3.16
VPS13AQ96RL7 RNU2-42P-201ENST00000410697 113 ntBASIC-4.72□□□□□ -3.16
VPS13AQ96RL7 RNU7-138P-201ENST00000459479 64 ntBASIC-4.72□□□□□ -3.16
VPS13AQ96RL7 RNU6-334P-201ENST00000517072 102 ntBASIC-4.72□□□□□ -3.16
VPS13AQ96RL7 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.72□□□□□ -3.17
VPS13AQ96RL7 AC093729.1-201ENST00000513074 128 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 AC093424.1-201ENST00000604999 338 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 MIR7110-201ENST00000612638 86 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 RNU6-715P-201ENST00000365204 103 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 AL590623.1-201ENST00000427864 105 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 AC123904.2-201ENST00000548059 300 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 AC099654.14-201ENST00000638599 341 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 SNORD4B-201ENST00000459083 72 ntBASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-4.73□□□□□ -3.17
VPS13AQ96RL7 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 RNU6-899P-201ENST00000363947 107 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 AL451105.1-201ENST00000450005 189 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 RNU6-162P-201ENST00000516228 103 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 RNU6-267P-201ENST00000516714 103 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 RNU6-836P-201ENST00000362920 107 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 RNU2-55P-201ENST00000411146 174 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 MTCO1P27-201ENST00000448269 226 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 RNU6-570P-201ENST00000517051 105 ntBASIC-4.74□□□□□ -3.17
VPS13AQ96RL7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-4.75□□□□□ -3.17
VPS13AQ96RL7 RNU6-810P-201ENST00000364001 107 ntBASIC-4.75□□□□□ -3.17
VPS13AQ96RL7 AC060780.3-201ENST00000589464 80 ntBASIC-4.75□□□□□ -3.17
VPS13AQ96RL7 Y_RNA.606-201ENST00000410579 103 ntBASIC-4.76□□□□□ -3.17
VPS13AQ96RL7 Y_RNA.373-201ENST00000365600 103 ntBASIC-4.77□□□□□ -3.17
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms