Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SNORD111-201ENST00000408139 94 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 MIR1261-201ENST00000408659 82 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 AC067940.1-201ENST00000458411 300 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 RNA5SP320-201ENST00000516263 124 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 MIR6715A-201ENST00000615929 79 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 MIR6739-201ENST00000622461 75 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
HPS1Q92902 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
HPS1Q92902 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
HPS1Q92902 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
HPS1Q92902 RNU1-41P-201ENST00000516161 162 ntBASIC2.1□□□□□ -2.07
HPS1Q92902 RNU1-48P-201ENST00000516400 162 ntBASIC2.1□□□□□ -2.07
HPS1Q92902 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.07
HPS1Q92902 MIR302D-201ENST00000362275 68 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 SNORD115-24-201ENST00000363528 82 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 Y_RNA.330-201ENST00000365230 109 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 RNA5SP425-201ENST00000410336 112 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 RNU7-102P-201ENST00000458948 62 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 RNU7-40P-201ENST00000516397 64 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 AC106800.4-201ENST00000614905 153 ntBASIC2.09□□□□□ -2.07
HPS1Q92902 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HPS1Q92902 MIR519E-201ENST00000385075 84 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 SNORA75.1-201ENST00000391130 148 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 RNU4-88P-201ENST00000411220 86 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 SNORD42B-201ENST00000458893 67 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 RNU6-165P-201ENST00000517170 99 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 SNORA40.17-201ENST00000517256 115 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 RNU7-161P-201ENST00000517289 62 ntBASIC2.08□□□□□ -2.08
HPS1Q92902 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HPS1Q92902 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HPS1Q92902 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
HPS1Q92902 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
HPS1Q92902 uc_338.16-201ENST00000621804 95 ntBASIC2.07□□□□□ -2.08
HPS1Q92902 MIR8063-201ENST00000621930 81 ntBASIC2.07□□□□□ -2.08
HPS1Q92902 Y_RNA.174-201ENST00000363781 105 ntBASIC2.06□□□□□ -2.08
HPS1Q92902 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
HPS1Q92902 SNORA31.14-201ENST00000516728 116 ntBASIC2.06□□□□□ -2.08
HPS1Q92902 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
HPS1Q92902 AL359821.1-201ENST00000605519 182 ntBASIC2.06□□□□□ -2.08
HPS1Q92902 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
HPS1Q92902 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HPS1Q92902 Y_RNA.379-201ENST00000365653 102 ntBASIC2.05□□□□□ -2.08
HPS1Q92902 MIR4804-201ENST00000581683 73 ntBASIC2.05□□□□□ -2.08
HPS1Q92902 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
HPS1Q92902 MIR1291-201ENST00000627649 87 ntBASIC2.05□□□□□ -2.08
HPS1Q92902 Y_RNA.32-201ENST00000362589 110 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 SNORD33-201ENST00000362761 85 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 Y_RNA.250-201ENST00000364542 110 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 SNORD1A-201ENST00000364968 72 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 RNU6V-201ENST00000384105 107 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 SNORA75.2-201ENST00000391138 150 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 SNORA75.3-201ENST00000391231 150 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 RNU7-56P-201ENST00000458744 62 ntBASIC2.04□□□□□ -2.08
HPS1Q92902 RNU6-1312P-201ENST00000362425 108 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 RNU6-1065P-201ENST00000384513 106 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 RNU6-520P-201ENST00000384717 104 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 snoU13.26-201ENST00000459452 105 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 AC079140.2-201ENST00000506193 142 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 MIR548V-201ENST00000584165 80 ntBASIC2.03□□□□□ -2.08
HPS1Q92902 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 MIR504-201ENST00000385065 83 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 snoU13.9-201ENST00000458927 103 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 RNU7-104P-201ENST00000459398 79 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 RNA5SP147-201ENST00000516493 109 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 MIR4648-201ENST00000580107 72 ntBASIC2.02□□□□□ -2.09
HPS1Q92902 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.02□□□□□ -2.09
HPS1Q92902 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HPS1Q92902 RNU6-990P-201ENST00000364385 104 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 RNU1-119P-201ENST00000391122 165 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 RNU7-74P-201ENST00000459104 62 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 snoU13.15-201ENST00000459407 104 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 AC048334.1-201ENST00000477975 159 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 uc_338.10-201ENST00000621872 182 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 AC067863.3-201ENST00000624172 122 ntBASIC2.01□□□□□ -2.09
HPS1Q92902 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HPS1Q92902 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HPS1Q92902 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
HPS1Q92902 RNU6-1162P-201ENST00000384443 104 ntBASIC2□□□□□ -2.09
HPS1Q92902 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
HPS1Q92902 RNU1-123P-201ENST00000458950 160 ntBASIC2□□□□□ -2.09
HPS1Q92902 AC026436.1-201ENST00000510537 270 ntBASIC2□□□□□ -2.09
HPS1Q92902 AC019176.1-201ENST00000518519 225 ntBASIC2□□□□□ -2.09
HPS1Q92902 AC018659.1-201ENST00000551083 169 ntBASIC2□□□□□ -2.09
HPS1Q92902 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
HPS1Q92902 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
HPS1Q92902 MIR630-201ENST00000384957 97 ntBASIC1.99□□□□□ -2.09
HPS1Q92902 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
HPS1Q92902 RNU6-902P-201ENST00000517212 91 ntBASIC1.99□□□□□ -2.09
HPS1Q92902 AC023827.1-201ENST00000569247 97 ntBASIC1.99□□□□□ -2.09
HPS1Q92902 MIR521-2-201ENST00000384818 87 ntBASIC1.98□□□□□ -2.09
HPS1Q92902 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms