Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NEDD1Q8NHV4 RNU6-668P-201ENST00000364180 107 ntBASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 U3.27-201ENST00000391237 200 ntBASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 AL133373.1-201ENST00000497098 94 ntBASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 GHRLOS.1-201ENST00000610995 70 ntBASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 AC084768.2-201ENST00000622736 221 ntBASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
NEDD1Q8NHV4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 RNA5SP264-201ENST00000363115 107 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 SNORA16.1-201ENST00000364597 132 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 RNU6-936P-201ENST00000384005 107 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 RNU6-439P-201ENST00000384188 106 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 SCARNA21.1-201ENST00000515996 128 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 RNU6-765P-201ENST00000516916 99 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
NEDD1Q8NHV4 RNU6-1184P-201ENST00000384588 108 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 SNORD75.2-201ENST00000408784 58 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 RNU6-947P-201ENST00000516264 106 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 AC138907.6-201ENST00000568401 126 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 AC138869.1-201ENST00000568623 124 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 NAMPTP3-201ENST00000569273 224 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 AC015688.6-201ENST00000577737 104 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
NEDD1Q8NHV4 MIR103A2-201ENST00000362154 78 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 RNU6-495P-201ENST00000362995 107 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 RNU6-940P-201ENST00000363433 104 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 RNU6-1039P-201ENST00000383931 107 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 SNORD83.1-201ENST00000411362 77 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 JTBP1-201ENST00000441314 247 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 MTND4LP1-201ENST00000446263 157 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 RNU7-24P-201ENST00000458867 62 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 MIR4255-201ENST00000579351 72 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 AC073869.9-201ENST00000641610 120 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.09□□□□□ -2.07
NEDD1Q8NHV4 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 MIR203A-201ENST00000384836 110 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 MIR1257-201ENST00000408490 117 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 AL603825.1-201ENST00000438481 80 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 MIR548AG2-201ENST00000581228 64 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 AL645939.4-201ENST00000604495 135 ntBASIC2.08□□□□□ -2.08
NEDD1Q8NHV4 RNU6-808P-201ENST00000391233 108 ntBASIC2.07□□□□□ -2.08
NEDD1Q8NHV4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.07□□□□□ -2.08
NEDD1Q8NHV4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.07□□□□□ -2.08
NEDD1Q8NHV4 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
NEDD1Q8NHV4 RNU6-1057P-201ENST00000517162 102 ntBASIC2.07□□□□□ -2.08
NEDD1Q8NHV4 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 RNU6-645P-201ENST00000364649 106 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 SNORA40.17-201ENST00000517256 115 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 MIR4419B-201ENST00000577260 68 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 SNORA77B-201ENST00000578179 125 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 MIR8081-201ENST00000611533 95 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
NEDD1Q8NHV4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NEDD1Q8NHV4 MIR6509-201ENST00000614603 85 ntBASIC2.05□□□□□ -2.08
NEDD1Q8NHV4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 MIR125B2-201ENST00000385128 89 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 RNA5SP299-201ENST00000391203 116 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 AC244505.6-201ENST00000452829 130 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
NEDD1Q8NHV4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.03□□□□□ -2.08
NEDD1Q8NHV4 SNORA75.1-201ENST00000391130 148 ntBASIC2.03□□□□□ -2.08
NEDD1Q8NHV4 MIR3938-201ENST00000582157 103 ntBASIC2.03□□□□□ -2.08
NEDD1Q8NHV4 RNA5SP117-201ENST00000365294 118 ntBASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 RNU6-535P-201ENST00000384722 107 ntBASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 RNU6-122P-201ENST00000516818 107 ntBASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 MIR3657-201ENST00000584818 117 ntBASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
NEDD1Q8NHV4 RNA5SP190-201ENST00000365222 118 ntBASIC2.01□□□□□ -2.09
NEDD1Q8NHV4 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
NEDD1Q8NHV4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NEDD1Q8NHV4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
NEDD1Q8NHV4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
NEDD1Q8NHV4 RNU6-934P-201ENST00000365154 107 ntBASIC2□□□□□ -2.09
NEDD1Q8NHV4 RNU6-1126P-201ENST00000384002 107 ntBASIC2□□□□□ -2.09
NEDD1Q8NHV4 SNORD13-201ENST00000459299 104 ntBASIC2□□□□□ -2.09
NEDD1Q8NHV4 RNU6-656P-201ENST00000516785 107 ntBASIC2□□□□□ -2.09
NEDD1Q8NHV4 MIR4299-201ENST00000577899 72 ntBASIC2□□□□□ -2.09
NEDD1Q8NHV4 AC008608.1-201ENST00000603910 127 ntBASIC2□□□□□ -2.09
NEDD1Q8NHV4 SNORD48-201ENST00000364953 64 ntBASIC1.99□□□□□ -2.09
NEDD1Q8NHV4 SNORD115-44-201ENST00000365391 82 ntBASIC1.99□□□□□ -2.09
NEDD1Q8NHV4 RNU6-54P-201ENST00000365563 107 ntBASIC1.99□□□□□ -2.09
NEDD1Q8NHV4 RNU4-88P-201ENST00000411220 86 ntBASIC1.99□□□□□ -2.09
NEDD1Q8NHV4 SNORD42B-201ENST00000458893 67 ntBASIC1.99□□□□□ -2.09
NEDD1Q8NHV4 AC036111.3-201ENST00000526389 112 ntBASIC1.99□□□□□ -2.09
NEDD1Q8NHV4 MIR4771-2-201ENST00000577758 74 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms