Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
CCDC116Q8IYX3 AL591806.2-201ENST00000433122 173 ntBASIC2.03□□□□□ -2.08
CCDC116Q8IYX3 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
CCDC116Q8IYX3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 RNA5SP458-201ENST00000516188 119 ntBASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 RN7SKP88-201ENST00000516847 250 ntBASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 7SK.8-201ENST00000612110 250 ntBASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 7SK.11-201ENST00000615477 250 ntBASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 7SK.13-201ENST00000622040 250 ntBASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC116Q8IYX3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 AC244098.3-201ENST00000424803 96 ntBASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 AL078603.1-201ENST00000603824 313 ntBASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC116Q8IYX3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC116Q8IYX3 RNU6-369P-201ENST00000362515 102 ntBASIC2□□□□□ -2.09
CCDC116Q8IYX3 AL591704.2-201ENST00000421658 181 ntBASIC2□□□□□ -2.09
CCDC116Q8IYX3 RNU7-13P-201ENST00000516413 62 ntBASIC2□□□□□ -2.09
CCDC116Q8IYX3 MIR4804-201ENST00000581683 73 ntBASIC2□□□□□ -2.09
CCDC116Q8IYX3 RNU6-987P-201ENST00000384759 104 ntBASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 MIR934-201ENST00000401241 83 ntBASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 RNU6-994P-201ENST00000410507 111 ntBASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 MIR4511-201ENST00000582784 87 ntBASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCDC116Q8IYX3 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
CCDC116Q8IYX3 RNU7-21P-201ENST00000459430 62 ntBASIC1.98□□□□□ -2.09
CCDC116Q8IYX3 RNU6-977P-201ENST00000516411 103 ntBASIC1.98□□□□□ -2.09
CCDC116Q8IYX3 MIR7111-201ENST00000619751 72 ntBASIC1.98□□□□□ -2.09
CCDC116Q8IYX3 AC103706.3-201ENST00000636297 85 ntBASIC1.98□□□□□ -2.09
CCDC116Q8IYX3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC116Q8IYX3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC116Q8IYX3 RNU1-119P-201ENST00000391122 165 ntBASIC1.97□□□□□ -2.09
CCDC116Q8IYX3 AL691482.2-201ENST00000457453 84 ntBASIC1.97□□□□□ -2.09
CCDC116Q8IYX3 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
CCDC116Q8IYX3 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
CCDC116Q8IYX3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 RNU6-499P-201ENST00000365615 107 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 MIR764-201ENST00000390811 85 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 SNORD75.2-201ENST00000408784 58 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 RNU7-56P-201ENST00000458744 62 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 AL157834.3-201ENST00000615543 103 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
CCDC116Q8IYX3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 MIR100-201ENST00000385259 80 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 RNU4-37P-201ENST00000410214 84 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 SNORA31.14-201ENST00000516728 116 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 MIR548AG2-201ENST00000581228 64 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 uc_338.16-201ENST00000621804 95 ntBASIC1.95□□□□□ -2.1
CCDC116Q8IYX3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 SNORD115-24-201ENST00000363528 82 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 RNA5SP403-201ENST00000363598 108 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 SNORA80D-201ENST00000384488 135 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
CCDC116Q8IYX3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.93□□□□□ -2.1
CCDC116Q8IYX3 RNU6-910P-201ENST00000390844 107 ntBASIC1.93□□□□□ -2.1
CCDC116Q8IYX3 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
CCDC116Q8IYX3 RNU7-90P-201ENST00000459216 62 ntBASIC1.93□□□□□ -2.1
CCDC116Q8IYX3 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
CCDC116Q8IYX3 AL109933.3-201ENST00000619095 188 ntBASIC1.93□□□□□ -2.1
CCDC116Q8IYX3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 MIR216B-201ENST00000390186 82 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 RNU1-78P-201ENST00000391248 165 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 RNU7-24P-201ENST00000458867 62 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 RNU6-982P-201ENST00000516216 102 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 RNU7-161P-201ENST00000517289 62 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 MIR3920-201ENST00000581751 86 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 AL359821.1-201ENST00000605519 182 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
CCDC116Q8IYX3 RNU6-495P-201ENST00000362995 107 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 MIR520F-201ENST00000384824 87 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 SNORA40.6-201ENST00000391153 128 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 RNU6-717P-201ENST00000459076 104 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 MIR4422-201ENST00000581938 83 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 AC069503.3-201ENST00000618674 145 ntBASIC1.91□□□□□ -2.1
CCDC116Q8IYX3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms