Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-539P-201ENST00000516665 103 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 YWHAEP2-201ENST00000580066 112 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 YWHAEP3-201ENST00000582767 121 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 AC106800.4-201ENST00000614905 153 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LIMS2Q7Z4I7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 RNU5F-1-201ENST00000362507 117 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 RPS26P5-201ENST00000418544 335 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 RPS27P16-201ENST00000425758 201 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 RNU6-1265P-201ENST00000516342 103 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 MIR4484-201ENST00000582855 83 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 U6.100-201ENST00000636230 99 ntBASIC1.41□□□□□ -2.18
LIMS2Q7Z4I7 Y_RNA.12-201ENST00000362393 112 ntBASIC1.4□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-369P-201ENST00000362515 102 ntBASIC1.4□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.239-201ENST00000364444 113 ntBASIC1.4□□□□□ -2.19
LIMS2Q7Z4I7 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
LIMS2Q7Z4I7 AC138907.6-201ENST00000568401 126 ntBASIC1.4□□□□□ -2.19
LIMS2Q7Z4I7 AC138869.1-201ENST00000568623 124 ntBASIC1.4□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.207-201ENST00000364142 106 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 RNA5SP245-201ENST00000364239 121 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 SNORD101-201ENST00000384027 73 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-634P-201ENST00000459134 106 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-70P-201ENST00000516438 60 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 RNU7-156P-201ENST00000517214 74 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-392P-201ENST00000364926 101 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 SNORA24B-201ENST00000384176 131 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 MIR599-201ENST00000385069 95 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 MIR942-201ENST00000401111 86 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 RNU7-21P-201ENST00000459430 62 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-871P-201ENST00000516122 100 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 MIR664A-201ENST00000626086 82 ntBASIC1.38□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-340P-201ENST00000364005 107 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-291P-201ENST00000384720 107 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.596-201ENST00000410462 109 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.606-201ENST00000410579 103 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 AC244505.6-201ENST00000452829 130 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 MIR3140-201ENST00000583685 90 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
LIMS2Q7Z4I7 RNY4P3-201ENST00000365254 95 ntBASIC1.36□□□□□ -2.19
LIMS2Q7Z4I7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
LIMS2Q7Z4I7 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
LIMS2Q7Z4I7 MIR4422-201ENST00000581938 83 ntBASIC1.36□□□□□ -2.19
LIMS2Q7Z4I7 MIR337-201ENST00000362281 93 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-587P-201ENST00000391282 106 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 MIR938-201ENST00000401216 83 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-935P-201ENST00000410371 100 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 RNU2-59P-201ENST00000410482 191 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 AC023827.1-201ENST00000569247 97 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 AC008608.1-201ENST00000603910 127 ntBASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.35□□□□□ -2.19
LIMS2Q7Z4I7 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-330P-201ENST00000363015 107 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-154P-201ENST00000384306 106 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 SNORA80D-201ENST00000384488 135 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 RNU6-535P-201ENST00000384722 107 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 RNU7-56P-201ENST00000458744 62 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 SNORD79.1-201ENST00000516069 84 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 MIR4804-201ENST00000581683 73 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.34□□□□□ -2.19
LIMS2Q7Z4I7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.33□□□□□ -2.2
LIMS2Q7Z4I7 Y_RNA.386-201ENST00000383913 105 ntBASIC1.33□□□□□ -2.2
LIMS2Q7Z4I7 RNU6-540P-201ENST00000384622 101 ntBASIC1.33□□□□□ -2.2
LIMS2Q7Z4I7 RNU7-102P-201ENST00000458948 62 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms