Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 Y_RNA.68-201ENST00000362881 102 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-1260P-201ENST00000362944 107 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.239-201ENST00000364444 113 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC092628.1-201ENST00000436250 252 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 SNORA31.2-201ENST00000516019 134 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC036111.3-201ENST00000526389 112 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 MIR4696-201ENST00000581431 70 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 AC005520.4-201ENST00000604337 90 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 U6.100-201ENST00000636230 99 ntBASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PRPF38BQ5VTL8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 MIR125B2-201ENST00000385128 89 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-1054P-201ENST00000411293 104 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 RPS27P16-201ENST00000425758 201 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 AC023827.1-201ENST00000569247 97 ntBASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.25□□□□□ -2.05
PRPF38BQ5VTL8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-664P-201ENST00000362381 107 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 SNORA75.2-201ENST00000391138 150 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 SNORA75.3-201ENST00000391231 150 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-765P-201ENST00000516916 99 ntBASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
PRPF38BQ5VTL8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 SNORD101-201ENST00000384027 73 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.433-201ENST00000384089 102 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 SNORD111-201ENST00000408139 94 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 Y_RNA.606-201ENST00000410579 103 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 AC003989.2-201ENST00000440224 169 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.23□□□□□ -2.05
PRPF38BQ5VTL8 RNY4P3-201ENST00000365254 95 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RNU6-364P-201ENST00000384387 107 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RNU1-40P-201ENST00000516816 164 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 RNU1-97P-201ENST00000516872 164 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 MTRNR2L2-201ENST00000604882 87 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRPF38BQ5VTL8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 RNU1-78P-201ENST00000391248 165 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 AL591704.2-201ENST00000421658 181 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 MIR4422-201ENST00000581938 83 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 MIR3675-201ENST00000583661 73 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
PRPF38BQ5VTL8 MIR9-2-201ENST00000384838 87 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 MIR934-201ENST00000401241 83 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-994P-201ENST00000410507 111 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RPS26P5-201ENST00000418544 335 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 AC138907.6-201ENST00000568401 126 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 AC138869.1-201ENST00000568623 124 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 AC106800.4-201ENST00000614905 153 ntBASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-681P-201ENST00000364012 104 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 SNORA24B-201ENST00000384176 131 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 SNORD45A-201ENST00000384512 84 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-630P-201ENST00000391258 106 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 RNU7-40P-201ENST00000516397 64 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 AC084768.2-201ENST00000622736 221 ntBASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.19□□□□□ -2.06
PRPF38BQ5VTL8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-824P-201ENST00000363724 104 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 MIR599-201ENST00000385069 95 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 AC097635.1-201ENST00000450678 155 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 AC097510.1-201ENST00000510945 133 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 AC008834.1-201ENST00000511612 175 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 MIR4676-201ENST00000583078 72 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 U6.81-201ENST00000612550 106 ntBASIC2.18□□□□□ -2.06
PRPF38BQ5VTL8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-535P-201ENST00000384722 107 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-987P-201ENST00000384759 104 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 MTND4LP19-201ENST00000403051 166 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 AC093423.1-201ENST00000440817 142 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PRPF38BQ5VTL8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 SNORD115-22-201ENST00000364456 82 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 MIR938-201ENST00000401216 83 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-1052P-201ENST00000411398 104 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 RNU6-719P-201ENST00000516671 104 ntBASIC2.16□□□□□ -2.06
PRPF38BQ5VTL8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
PRPF38BQ5VTL8 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 Y_RNA.363-201ENST00000365529 113 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-895P-201ENST00000384125 103 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 Y_RNA.443-201ENST00000384135 111 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 SNORA80D-201ENST00000384488 135 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-910P-201ENST00000390844 107 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 RNU6-935P-201ENST00000410371 100 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 AC027335.2-201ENST00000624030 375 ntBASIC2.15□□□□□ -2.07
PRPF38BQ5VTL8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 270.2 ms