Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RNU6-800P-201ENST00000384473 103 ntBASIC2.13□□□□□ -2.07
USP46P62068 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
USP46P62068 RNU7-90P-201ENST00000459216 62 ntBASIC2.13□□□□□ -2.07
USP46P62068 RNU6-287P-201ENST00000516230 98 ntBASIC2.13□□□□□ -2.07
USP46P62068 U6.81-201ENST00000612550 106 ntBASIC2.13□□□□□ -2.07
USP46P62068 MIR4773-1-201ENST00000637203 78 ntBASIC2.13□□□□□ -2.07
USP46P62068 SNORA24B-201ENST00000384176 131 ntBASIC2.12□□□□□ -2.07
USP46P62068 AC244505.6-201ENST00000452829 130 ntBASIC2.12□□□□□ -2.07
USP46P62068 MIR1-1-201ENST00000362147 71 ntBASIC2.11□□□□□ -2.07
USP46P62068 MIR337-201ENST00000362281 93 ntBASIC2.11□□□□□ -2.07
USP46P62068 Y_RNA.386-201ENST00000383913 105 ntBASIC2.11□□□□□ -2.07
USP46P62068 MIR1265-201ENST00000408444 86 ntBASIC2.11□□□□□ -2.07
USP46P62068 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
USP46P62068 RNU6-369P-201ENST00000362515 102 ntBASIC2.1□□□□□ -2.07
USP46P62068 SNORD45.1-201ENST00000363181 77 ntBASIC2.1□□□□□ -2.07
USP46P62068 SNORD45A-201ENST00000384512 84 ntBASIC2.1□□□□□ -2.07
USP46P62068 RNU6-1177P-201ENST00000391058 104 ntBASIC2.1□□□□□ -2.07
USP46P62068 RNU7-56P-201ENST00000458744 62 ntBASIC2.1□□□□□ -2.07
USP46P62068 AC008834.1-201ENST00000511612 175 ntBASIC2.1□□□□□ -2.07
USP46P62068 RNU7-13P-201ENST00000516413 62 ntBASIC2.1□□□□□ -2.07
USP46P62068 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
USP46P62068 MIR520F-201ENST00000384824 87 ntBASIC2.09□□□□□ -2.07
USP46P62068 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
USP46P62068 AL591806.2-201ENST00000433122 173 ntBASIC2.09□□□□□ -2.07
USP46P62068 snoU13.23-201ENST00000458863 104 ntBASIC2.09□□□□□ -2.07
USP46P62068 MIR2113-201ENST00000459007 91 ntBASIC2.09□□□□□ -2.07
USP46P62068 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
USP46P62068 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.09□□□□□ -2.07
USP46P62068 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
USP46P62068 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USP46P62068 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
USP46P62068 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
USP46P62068 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USP46P62068 Y_RNA.32-201ENST00000362589 110 ntBASIC2.08□□□□□ -2.08
USP46P62068 SNORD115-44-201ENST00000365391 82 ntBASIC2.08□□□□□ -2.08
USP46P62068 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.08□□□□□ -2.08
USP46P62068 SNORA31.14-201ENST00000516728 116 ntBASIC2.08□□□□□ -2.08
USP46P62068 RNU6-902P-201ENST00000517212 91 ntBASIC2.08□□□□□ -2.08
USP46P62068 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP46P62068 SNORD115-24-201ENST00000363528 82 ntBASIC2.07□□□□□ -2.08
USP46P62068 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.07□□□□□ -2.08
USP46P62068 AC067940.1-201ENST00000458411 300 ntBASIC2.07□□□□□ -2.08
USP46P62068 RNU6-274P-201ENST00000459566 107 ntBASIC2.07□□□□□ -2.08
USP46P62068 AC108210.2-201ENST00000503681 201 ntBASIC2.07□□□□□ -2.08
USP46P62068 SNORD79.1-201ENST00000516069 84 ntBASIC2.07□□□□□ -2.08
USP46P62068 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
USP46P62068 U3.27-201ENST00000391237 200 ntBASIC2.06□□□□□ -2.08
USP46P62068 AL078603.1-201ENST00000603824 313 ntBASIC2.06□□□□□ -2.08
USP46P62068 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
USP46P62068 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USP46P62068 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USP46P62068 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP46P62068 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
USP46P62068 Y_RNA.205-201ENST00000364128 113 ntBASIC2.05□□□□□ -2.08
USP46P62068 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
USP46P62068 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
USP46P62068 AC012493.3-201ENST00000604494 112 ntBASIC2.05□□□□□ -2.08
USP46P62068 MIR6845-201ENST00000613182 61 ntBASIC2.05□□□□□ -2.08
USP46P62068 RNU6-382P-201ENST00000365181 106 ntBASIC2.04□□□□□ -2.08
USP46P62068 RNU6-881P-201ENST00000516813 102 ntBASIC2.04□□□□□ -2.08
USP46P62068 RNU6-295P-201ENST00000516901 104 ntBASIC2.04□□□□□ -2.08
USP46P62068 SNORA70.22-201ENST00000517160 124 ntBASIC2.04□□□□□ -2.08
USP46P62068 MIR8053-201ENST00000613344 75 ntBASIC2.04□□□□□ -2.08
USP46P62068 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
USP46P62068 RNU6-630P-201ENST00000391258 106 ntBASIC2.03□□□□□ -2.08
USP46P62068 RNU7-104P-201ENST00000459398 79 ntBASIC2.03□□□□□ -2.08
USP46P62068 MIR4781-201ENST00000585250 76 ntBASIC2.03□□□□□ -2.08
USP46P62068 uc_338.16-201ENST00000621804 95 ntBASIC2.03□□□□□ -2.08
USP46P62068 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
USP46P62068 Y_RNA.174-201ENST00000363781 105 ntBASIC2.02□□□□□ -2.09
USP46P62068 Y_RNA.258-201ENST00000364613 105 ntBASIC2.02□□□□□ -2.09
USP46P62068 MIR222-201ENST00000384992 110 ntBASIC2.02□□□□□ -2.09
USP46P62068 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USP46P62068 RNU6-604P-201ENST00000390917 100 ntBASIC2.02□□□□□ -2.09
USP46P62068 AL359821.1-201ENST00000605519 182 ntBASIC2.02□□□□□ -2.09
USP46P62068 SNORD115-22-201ENST00000364456 82 ntBASIC2.01□□□□□ -2.09
USP46P62068 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
USP46P62068 AC244098.3-201ENST00000424803 96 ntBASIC2.01□□□□□ -2.09
USP46P62068 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
USP46P62068 RNU7-161P-201ENST00000517289 62 ntBASIC2□□□□□ -2.09
USP46P62068 AC005520.4-201ENST00000604337 90 ntBASIC2□□□□□ -2.09
USP46P62068 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
USP46P62068 RNA5SP403-201ENST00000363598 108 ntBASIC1.99□□□□□ -2.09
USP46P62068 RNA5SP99-201ENST00000364020 114 ntBASIC1.99□□□□□ -2.09
USP46P62068 RNU6-1126P-201ENST00000384002 107 ntBASIC1.99□□□□□ -2.09
USP46P62068 RNU6-482P-201ENST00000391068 107 ntBASIC1.99□□□□□ -2.09
USP46P62068 AC093423.1-201ENST00000440817 142 ntBASIC1.99□□□□□ -2.09
USP46P62068 AL691482.2-201ENST00000457453 84 ntBASIC1.99□□□□□ -2.09
USP46P62068 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
USP46P62068 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
USP46P62068 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
USP46P62068 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.98□□□□□ -2.09
USP46P62068 MIR1827-201ENST00000408549 66 ntBASIC1.98□□□□□ -2.09
USP46P62068 MIR548AG2-201ENST00000581228 64 ntBASIC1.98□□□□□ -2.09
USP46P62068 MIR3920-201ENST00000581751 86 ntBASIC1.98□□□□□ -2.09
USP46P62068 AL136317.1-201ENST00000612653 226 ntBASIC1.98□□□□□ -2.09
USP46P62068 RMST_2.1-201ENST00000617263 136 ntBASIC1.98□□□□□ -2.09
USP46P62068 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
USP46P62068 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
USP46P62068 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms