Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-823P-201ENST00000391042 103 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 MIR1285-2-201ENST00000408311 88 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 MIR1252-201ENST00000408861 65 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-719P-201ENST00000516671 104 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 RNY4P20-201ENST00000516678 93 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 AC026407.1-201ENST00000518369 204 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 MIR6888-201ENST00000621977 67 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.27□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-990P-201ENST00000364385 104 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-643P-201ENST00000384018 107 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 SNORD38.2-201ENST00000384470 69 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 MT-TI-201ENST00000387365 69 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-578P-201ENST00000390980 103 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-466P-201ENST00000391224 103 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU2-51P-201ENST00000410708 197 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 RNU6-158P-201ENST00000517104 100 ntBASIC-1.28□□□□□ -2.61
TRAV1-1A0A0B4J248 MIR365A-201ENST00000362260 87 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORA62.4-201ENST00000365504 151 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-746P-201ENST00000384112 109 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 AL589823.1-201ENST00000429577 183 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 RNY3P15-201ENST00000516297 97 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-479P-201ENST00000516348 105 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR1255B1-201ENST00000636325 63 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR1302-1-201ENST00000637932 143 ntBASIC-1.29□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-770P-201ENST00000363929 105 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORD19B-201ENST00000459623 84 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU7-6P-201ENST00000516845 62 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORA40.15-201ENST00000516884 107 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 YWHAEP3-201ENST00000582767 121 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 AL353803.5-201ENST00000599815 141 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 AL445584.3-201ENST00000617173 78 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 AC132825.6-201ENST00000638861 357 ntBASIC-1.3□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-876P-201ENST00000391295 104 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-75P-201ENST00000515944 104 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 RNY3P16-201ENST00000516338 101 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-706P-201ENST00000517229 104 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR4282-201ENST00000583613 67 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.31□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR548G-201ENST00000408442 89 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 FGF7P4-201ENST00000509595 295 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 FGF7P7-201ENST00000514120 227 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORD63.1-201ENST00000516178 80 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR4308-201ENST00000580634 81 ntBASIC-1.32□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORD115-19-201ENST00000363098 82 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORD115-18-201ENST00000363293 82 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORD115-17-201ENST00000364612 82 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-768P-201ENST00000384683 107 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 SNORA7.5-201ENST00000410672 110 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 Z83846.1-201ENST00000446798 265 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 AC108081.1-201ENST00000604358 221 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 AL132765.2-201ENST00000610812 351 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 MIR6818-201ENST00000621576 65 ntBASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.33□□□□□ -2.62
TRAV1-1A0A0B4J248 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 RNY1P11-201ENST00000363759 113 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 AC021146.9-201ENST00000512503 156 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 RNU6-90P-201ENST00000606352 106 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 U6.96-201ENST00000636425 70 ntBASIC-1.34□□□□□ -2.62
TRAV1-1A0A0B4J248 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 RNU6-309P-201ENST00000364573 106 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 U3.27-201ENST00000391237 200 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 MIR889-201ENST00000401280 79 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 AC113618.1-201ENST00000416747 285 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 MTND3P22-201ENST00000510932 243 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 U2.14-201ENST00000615943 113 ntBASIC-1.35□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.36□□□□□ -2.63
TRAV1-1A0A0B4J248 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.36□□□□□ -2.63
TRAV1-1A0A0B4J248 SNORD114-3-201ENST00000364969 75 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms