Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 Y_RNA.371-201ENST00000365591 113 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 MIR154-201ENST00000385243 84 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 SNORD90-201ENST00000391145 111 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 snoU13.23-201ENST00000458863 104 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 DLEU2_3.1-201ENST00000620005 73 ntBASIC2□□□□□ -2.09
HRH3Q9Y5N1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HRH3Q9Y5N1 RNU6-649P-201ENST00000384463 107 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 RNU6-535P-201ENST00000384722 107 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 AL591704.2-201ENST00000421658 181 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 AL606490.4-201ENST00000423117 127 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 RNU6-687P-201ENST00000516443 89 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 AC106800.4-201ENST00000614905 153 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 uc_338.20-201ENST00000621563 178 ntBASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HRH3Q9Y5N1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 MIR938-201ENST00000401216 83 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 RNU6-935P-201ENST00000410371 100 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 RNU6-994P-201ENST00000410507 111 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 snoU13.17-201ENST00000458802 104 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 SNORA31.2-201ENST00000516019 134 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 MIR4422-201ENST00000581938 83 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 U6.100-201ENST00000636230 99 ntBASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HRH3Q9Y5N1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 RNU6-340P-201ENST00000364005 107 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 RNU1-78P-201ENST00000391248 165 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 AC023827.1-201ENST00000569247 97 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 MIR4676-201ENST00000583078 72 ntBASIC1.97□□□□□ -2.09
HRH3Q9Y5N1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.09
HRH3Q9Y5N1 Y_RNA.340-201ENST00000365330 92 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 SNORA75.2-201ENST00000391138 150 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 SNORA75.3-201ENST00000391231 150 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 AC027335.2-201ENST00000624030 375 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 MIR664A-201ENST00000626086 82 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 MIR219B-201ENST00000637023 88 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 ZNF209P-201ENST00000593450 2304 ntBASIC1.96□□□□□ -2.1
HRH3Q9Y5N1 SNORD30.1-201ENST00000391309 70 ntBASIC1.95□□□□□ -2.1
HRH3Q9Y5N1 MIR942-201ENST00000401111 86 ntBASIC1.95□□□□□ -2.1
HRH3Q9Y5N1 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
HRH3Q9Y5N1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.95□□□□□ -2.1
HRH3Q9Y5N1 AL645939.4-201ENST00000604495 135 ntBASIC1.95□□□□□ -2.1
HRH3Q9Y5N1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.95□□□□□ -2.1
HRH3Q9Y5N1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 SNORA80D-201ENST00000384488 135 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 RNU2-59P-201ENST00000410482 191 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 AC097510.1-201ENST00000510945 133 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 RNU7-40P-201ENST00000516397 64 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 RNU6-977P-201ENST00000516411 103 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 AC008608.1-201ENST00000603910 127 ntBASIC1.94□□□□□ -2.1
HRH3Q9Y5N1 RNU6-1241P-201ENST00000384536 107 ntBASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 MIR451A-201ENST00000385059 72 ntBASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 AC108210.2-201ENST00000503681 201 ntBASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 MIR3140-201ENST00000583685 90 ntBASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
HRH3Q9Y5N1 RNU6-154P-201ENST00000384306 106 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 RNU6-291P-201ENST00000384720 107 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 RNU1-119P-201ENST00000391122 165 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 MIR1265-201ENST00000408444 86 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 RNU7-90P-201ENST00000459216 62 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 MIR3675-201ENST00000583661 73 ntBASIC1.92□□□□□ -2.1
HRH3Q9Y5N1 SNORD115-44-201ENST00000365391 82 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 MIR100-201ENST00000385259 80 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 Y_RNA.606-201ENST00000410579 103 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 AC067940.1-201ENST00000458411 300 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 RNU7-102P-201ENST00000458948 62 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HRH3Q9Y5N1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 MIR1-1-201ENST00000362147 71 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 U3.27-201ENST00000391237 200 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 MIR934-201ENST00000401241 83 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 RNU6-1052P-201ENST00000411398 104 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 AL603825.1-201ENST00000438481 80 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 RNU7-21P-201ENST00000459430 62 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.9□□□□□ -2.11
HRH3Q9Y5N1 RNU6-719P-201ENST00000516671 104 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms