Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 HAR1A.1-201ENST00000459583 118 ntBASIC-1.91□□□□□ -2.72
VPS29Q9UBQ0 AC021443.1-201ENST00000604478 211 ntBASIC-1.91□□□□□ -2.72
VPS29Q9UBQ0 RNU6-664P-201ENST00000362381 107 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 SNORA63.7-201ENST00000365579 123 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 MIR527-201ENST00000385244 85 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 RNU7-164P-201ENST00000459221 62 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 RNA5SP180-201ENST00000516181 101 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 AC090574.1-201ENST00000623186 233 ntBASIC-1.92□□□□□ -2.72
VPS29Q9UBQ0 MIR29B1-201ENST00000385015 81 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 RNA5SP236-201ENST00000516169 116 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 AC138907.4-201ENST00000570107 226 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 MIR5591-201ENST00000578248 65 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 MIR4464-201ENST00000580818 92 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 AC084782.3-201ENST00000612282 578 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 MIR6818-201ENST00000621576 65 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.93□□□□□ -2.72
VPS29Q9UBQ0 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 SNORA63.6-201ENST00000364921 119 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 SNORD116-6-201ENST00000384711 96 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 MIR548F1-201ENST00000408667 84 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 RNU6-935P-201ENST00000410371 100 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 RNU4-61P-201ENST00000411243 107 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 AC138393.2-201ENST00000414742 246 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 AL121914.1-201ENST00000450188 156 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 RNU7-123P-201ENST00000515911 60 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 YWHAEP3-201ENST00000582767 121 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 AC092794.1-201ENST00000612734 582 ntBASIC-1.94□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 SNORD38.2-201ENST00000384470 69 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 MIR1302-11-201ENST00000408051 138 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 MIR1302-9-201ENST00000408365 138 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 MIR1302-10-201ENST00000408734 138 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 RNU6-121P-201ENST00000410525 99 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 RNU6-240P-201ENST00000516098 97 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 AL353803.5-201ENST00000599815 141 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 MIR1302-2-201ENST00000607096 138 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 AC073869.6-201ENST00000640656 341 ntBASIC-1.95□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.96□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.96□□□□□ -2.72
VPS29Q9UBQ0 RNU6-746P-201ENST00000384112 109 ntBASIC-1.96□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.96□□□□□ -2.72
VPS29Q9UBQ0 MIR4770-201ENST00000579149 58 ntBASIC-1.96□□□□□ -2.72
VPS29Q9UBQ0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.96□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 MIR451A-201ENST00000385059 72 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 RNU6-976P-201ENST00000516086 111 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 MIR4308-201ENST00000580634 81 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 MIR6888-201ENST00000621977 67 ntBASIC-1.97□□□□□ -2.72
VPS29Q9UBQ0 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 RNU6-235P-201ENST00000362644 107 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 RNU6-103P-201ENST00000363686 107 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 MIR889-201ENST00000401280 79 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 RNU7-152P-201ENST00000458982 64 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 RNU6-720P-201ENST00000516363 108 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 AL445584.3-201ENST00000617173 78 ntBASIC-1.98□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.99□□□□□ -2.73
VPS29Q9UBQ0 RNU4-17P-201ENST00000365598 141 ntBASIC-1.99□□□□□ -2.73
VPS29Q9UBQ0 RNU2-51P-201ENST00000410708 197 ntBASIC-1.99□□□□□ -2.73
VPS29Q9UBQ0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.99□□□□□ -2.73
VPS29Q9UBQ0 AP002392.1-201ENST00000537692 208 ntBASIC-1.99□□□□□ -2.73
VPS29Q9UBQ0 RNU6-647P-201ENST00000364243 107 ntBASIC-2□□□□□ -2.73
VPS29Q9UBQ0 RNU6-466P-201ENST00000391224 103 ntBASIC-2□□□□□ -2.73
VPS29Q9UBQ0 MIR1285-2-201ENST00000408311 88 ntBASIC-2□□□□□ -2.73
VPS29Q9UBQ0 SNORD2.1-201ENST00000458762 69 ntBASIC-2□□□□□ -2.73
VPS29Q9UBQ0 RNU6-1006P-201ENST00000516998 103 ntBASIC-2□□□□□ -2.73
VPS29Q9UBQ0 MIR198-201ENST00000637333 62 ntBASIC-2□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.01□□□□□ -2.73
VPS29Q9UBQ0 RNU4-24P-201ENST00000364565 139 ntBASIC-2.01□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.01□□□□□ -2.73
VPS29Q9UBQ0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.01□□□□□ -2.73
VPS29Q9UBQ0 U6.96-201ENST00000636425 70 ntBASIC-2.01□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.02□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.02□□□□□ -2.73
VPS29Q9UBQ0 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.02□□□□□ -2.73
VPS29Q9UBQ0 U3.27-201ENST00000391237 200 ntBASIC-2.02□□□□□ -2.73
VPS29Q9UBQ0 MIR4520-1-201ENST00000582609 70 ntBASIC-2.02□□□□□ -2.73
VPS29Q9UBQ0 MIR1246-201ENST00000636535 73 ntBASIC-2.02□□□□□ -2.73
VPS29Q9UBQ0 SNORD115-33-201ENST00000363723 82 ntBASIC-2.03□□□□□ -2.73
VPS29Q9UBQ0 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.03□□□□□ -2.73
VPS29Q9UBQ0 SNORA26.4-201ENST00000391188 123 ntBASIC-2.03□□□□□ -2.73
VPS29Q9UBQ0 AC022028.1-201ENST00000412054 408 ntBASIC-2.03□□□□□ -2.73
VPS29Q9UBQ0 AC090617.8-201ENST00000623339 167 ntBASIC-2.03□□□□□ -2.73
VPS29Q9UBQ0 SNORA40.15-201ENST00000516884 107 ntBASIC-2.04□□□□□ -2.74
VPS29Q9UBQ0 AL365265.1-201ENST00000621045 234 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms