Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC067940.1-201ENST00000458411 300 ntBASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 RNU7-161P-201ENST00000517289 62 ntBASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 MIR3198-2-201ENST00000577868 80 ntBASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 AC092634.7-201ENST00000621022 103 ntBASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 MIR634-201ENST00000385208 97 ntBASIC3.21□□□□□ -1.9
FOXD4L1Q9NU39 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 RNA5SP356-201ENST00000515972 94 ntBASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.2□□□□□ -1.9
FOXD4L1Q9NU39 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
FOXD4L1Q9NU39 MIR26A1-201ENST00000362205 77 ntBASIC3.19□□□□□ -1.9
FOXD4L1Q9NU39 RNU1-112P-201ENST00000364401 164 ntBASIC3.19□□□□□ -1.9
FOXD4L1Q9NU39 MIR3657-201ENST00000584818 117 ntBASIC3.19□□□□□ -1.9
FOXD4L1Q9NU39 SNORA25.5-201ENST00000363782 126 ntBASIC3.18□□□□□ -1.9
FOXD4L1Q9NU39 RNU6-645P-201ENST00000364649 106 ntBASIC3.18□□□□□ -1.9
FOXD4L1Q9NU39 RNU6-1335P-201ENST00000365426 107 ntBASIC3.18□□□□□ -1.9
FOXD4L1Q9NU39 MIR7-2-201ENST00000384970 110 ntBASIC3.18□□□□□ -1.9
FOXD4L1Q9NU39 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
FOXD4L1Q9NU39 AC067863.3-201ENST00000624172 122 ntBASIC3.18□□□□□ -1.9
FOXD4L1Q9NU39 RNU6-54P-201ENST00000365563 107 ntBASIC3.17□□□□□ -1.9
FOXD4L1Q9NU39 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
FOXD4L1Q9NU39 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
FOXD4L1Q9NU39 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
FOXD4L1Q9NU39 RNU6-940P-201ENST00000363433 104 ntBASIC3.16□□□□□ -1.9
FOXD4L1Q9NU39 MIR519E-201ENST00000385075 84 ntBASIC3.16□□□□□ -1.9
FOXD4L1Q9NU39 RNU6-910P-201ENST00000390844 107 ntBASIC3.16□□□□□ -1.9
FOXD4L1Q9NU39 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
FOXD4L1Q9NU39 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
FOXD4L1Q9NU39 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXD4L1Q9NU39 RNU7-74P-201ENST00000459104 62 ntBASIC3.15□□□□□ -1.91
FOXD4L1Q9NU39 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXD4L1Q9NU39 AC079600.2-201ENST00000550076 130 ntBASIC3.15□□□□□ -1.91
FOXD4L1Q9NU39 MIR4422-201ENST00000581938 83 ntBASIC3.15□□□□□ -1.91
FOXD4L1Q9NU39 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXD4L1Q9NU39 RNU6-260P-201ENST00000384092 107 ntBASIC3.14□□□□□ -1.91
FOXD4L1Q9NU39 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXD4L1Q9NU39 RNU6-829P-201ENST00000363700 112 ntBASIC3.13□□□□□ -1.91
FOXD4L1Q9NU39 RNU1-78P-201ENST00000391248 165 ntBASIC3.13□□□□□ -1.91
FOXD4L1Q9NU39 AL138827.1-201ENST00000402666 306 ntBASIC3.13□□□□□ -1.91
FOXD4L1Q9NU39 HMGN2P19-201ENST00000425149 265 ntBASIC3.13□□□□□ -1.91
FOXD4L1Q9NU39 MIR466-201ENST00000580653 84 ntBASIC3.13□□□□□ -1.91
FOXD4L1Q9NU39 MIR4325-201ENST00000583049 90 ntBASIC3.13□□□□□ -1.91
FOXD4L1Q9NU39 RNA5SP192-201ENST00000364404 120 ntBASIC3.12□□□□□ -1.91
FOXD4L1Q9NU39 RNU1-123P-201ENST00000458950 160 ntBASIC3.12□□□□□ -1.91
FOXD4L1Q9NU39 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXD4L1Q9NU39 RNU6-1079P-201ENST00000362861 110 ntBASIC3.11□□□□□ -1.91
FOXD4L1Q9NU39 RNU6V-201ENST00000384105 107 ntBASIC3.11□□□□□ -1.91
FOXD4L1Q9NU39 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXD4L1Q9NU39 ZNF355P-201ENST00000427301 3216 ntBASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 RNU6-851P-201ENST00000384565 107 ntBASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 MIR221-201ENST00000385135 110 ntBASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 SNORA11.2-201ENST00000408318 127 ntBASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 SCARNA21.1-201ENST00000515996 128 ntBASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC3.1□□□□□ -1.91
FOXD4L1Q9NU39 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
FOXD4L1Q9NU39 SNORD79.1-201ENST00000516069 84 ntBASIC3.09□□□□□ -1.91
FOXD4L1Q9NU39 RNU1-40P-201ENST00000516816 164 ntBASIC3.09□□□□□ -1.91
FOXD4L1Q9NU39 RNU1-97P-201ENST00000516872 164 ntBASIC3.09□□□□□ -1.91
FOXD4L1Q9NU39 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
FOXD4L1Q9NU39 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.09□□□□□ -1.92
FOXD4L1Q9NU39 SNORA2.1-201ENST00000363089 137 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 Y_RNA.236-201ENST00000364427 111 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 RNU6-135P-201ENST00000516769 101 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 MIR3670-2-201ENST00000582974 65 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 MIR3670-1-201ENST00000584160 65 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 MIR3670-3-201ENST00000584855 65 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 MIR3670-4-201ENST00000612260 65 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 AL136317.1-201ENST00000612653 226 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 MIR6852-201ENST00000621699 66 ntBASIC3.08□□□□□ -1.92
FOXD4L1Q9NU39 SNORA5B-201ENST00000363786 132 ntBASIC3.07□□□□□ -1.92
FOXD4L1Q9NU39 RNA5SP299-201ENST00000391203 116 ntBASIC3.07□□□□□ -1.92
FOXD4L1Q9NU39 MIR1827-201ENST00000408549 66 ntBASIC3.07□□□□□ -1.92
FOXD4L1Q9NU39 RNA5SP233-201ENST00000459153 113 ntBASIC3.07□□□□□ -1.92
FOXD4L1Q9NU39 MIR4446-201ENST00000578505 67 ntBASIC3.07□□□□□ -1.92
FOXD4L1Q9NU39 RNA5SP215-201ENST00000363440 122 ntBASIC3.06□□□□□ -1.92
FOXD4L1Q9NU39 RNA5SP181-201ENST00000410246 98 ntBASIC3.06□□□□□ -1.92
FOXD4L1Q9NU39 AC087499.2-201ENST00000432861 149 ntBASIC3.06□□□□□ -1.92
FOXD4L1Q9NU39 AL137847.3-201ENST00000611521 109 ntBASIC3.06□□□□□ -1.92
FOXD4L1Q9NU39 MIR7106-201ENST00000612419 65 ntBASIC3.06□□□□□ -1.92
FOXD4L1Q9NU39 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXD4L1Q9NU39 RNA5SP117-201ENST00000365294 118 ntBASIC3.05□□□□□ -1.92
FOXD4L1Q9NU39 RMST_2.1-201ENST00000617263 136 ntBASIC3.05□□□□□ -1.92
FOXD4L1Q9NU39 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXD4L1Q9NU39 SNORD42B-201ENST00000458893 67 ntBASIC3.04□□□□□ -1.92
FOXD4L1Q9NU39 S100A11P2-201ENST00000467589 312 ntBASIC3.04□□□□□ -1.92
FOXD4L1Q9NU39 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXD4L1Q9NU39 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
FOXD4L1Q9NU39 MIR548L-201ENST00000408303 86 ntBASIC3.03□□□□□ -1.92
FOXD4L1Q9NU39 RNU6ATAC8P-201ENST00000408460 126 ntBASIC3.03□□□□□ -1.92
FOXD4L1Q9NU39 RNU6-469P-201ENST00000516253 101 ntBASIC3.03□□□□□ -1.92
FOXD4L1Q9NU39 RNA5SP282-201ENST00000516355 108 ntBASIC3.03□□□□□ -1.92
FOXD4L1Q9NU39 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
FOXD4L1Q9NU39 AC008834.1-201ENST00000511612 175 ntBASIC3.02□□□□□ -1.93
FOXD4L1Q9NU39 MIR4781-201ENST00000585250 76 ntBASIC3.02□□□□□ -1.93
FOXD4L1Q9NU39 FO624990.1-201ENST00000636373 85 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms