Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RN7SL75P-201ENST00000461926 281 ntBASIC4.51□□□□□ -1.69
SENP3Q9H4L4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.51□□□□□ -1.69
SENP3Q9H4L4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.51□□□□□ -1.69
SENP3Q9H4L4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SENP3Q9H4L4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SENP3Q9H4L4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SENP3Q9H4L4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SENP3Q9H4L4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.51□□□□□ -1.69
SENP3Q9H4L4 Y_RNA.407-201ENST00000383986 113 ntBASIC4.5□□□□□ -1.69
SENP3Q9H4L4 RNA5SP484-201ENST00000458857 111 ntBASIC4.5□□□□□ -1.69
SENP3Q9H4L4 AC243829.3-201ENST00000622177 108 ntBASIC4.5□□□□□ -1.69
SENP3Q9H4L4 U2.18-201ENST00000622185 84 ntBASIC4.5□□□□□ -1.69
SENP3Q9H4L4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.5□□□□□ -1.69
SENP3Q9H4L4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SENP3Q9H4L4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
SENP3Q9H4L4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SENP3Q9H4L4 MIR100-201ENST00000385259 80 ntBASIC4.49□□□□□ -1.69
SENP3Q9H4L4 SNORA75.2-201ENST00000391138 150 ntBASIC4.49□□□□□ -1.69
SENP3Q9H4L4 SNORA75.3-201ENST00000391231 150 ntBASIC4.49□□□□□ -1.69
SENP3Q9H4L4 AC006989.1-201ENST00000427212 131 ntBASIC4.49□□□□□ -1.69
SENP3Q9H4L4 MIR4639-201ENST00000584938 69 ntBASIC4.49□□□□□ -1.69
SENP3Q9H4L4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SENP3Q9H4L4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SENP3Q9H4L4 MIR520F-201ENST00000384824 87 ntBASIC4.48□□□□□ -1.69
SENP3Q9H4L4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC4.48□□□□□ -1.69
SENP3Q9H4L4 SNORA7.4-201ENST00000384249 137 ntBASIC4.47□□□□□ -1.69
SENP3Q9H4L4 RNA5SP229-201ENST00000410809 99 ntBASIC4.47□□□□□ -1.69
SENP3Q9H4L4 SNORA77B-201ENST00000578179 125 ntBASIC4.47□□□□□ -1.69
SENP3Q9H4L4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SENP3Q9H4L4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SENP3Q9H4L4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4.46□□□□□ -1.7
SENP3Q9H4L4 Y_RNA.164-201ENST00000363709 102 ntBASIC4.46□□□□□ -1.7
SENP3Q9H4L4 RNU6-598P-201ENST00000364017 105 ntBASIC4.46□□□□□ -1.7
SENP3Q9H4L4 RNU6-726P-201ENST00000364680 107 ntBASIC4.46□□□□□ -1.7
SENP3Q9H4L4 AC090543.2-201ENST00000483963 348 ntBASIC4.46□□□□□ -1.7
SENP3Q9H4L4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SENP3Q9H4L4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SENP3Q9H4L4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SENP3Q9H4L4 RNA5SP99-201ENST00000364020 114 ntBASIC4.45□□□□□ -1.7
SENP3Q9H4L4 MIR2276-201ENST00000516886 89 ntBASIC4.45□□□□□ -1.7
SENP3Q9H4L4 AC243829.6-201ENST00000612652 106 ntBASIC4.45□□□□□ -1.7
SENP3Q9H4L4 RNU6-716P-201ENST00000365621 103 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 SNORA8.2-201ENST00000384372 139 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 MIR196B-201ENST00000384852 84 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 SNORA70.14-201ENST00000516205 110 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 RNU6-135P-201ENST00000516769 101 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 MIR4658-201ENST00000584344 65 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 MIR486-1-201ENST00000612171 68 ntBASIC4.44□□□□□ -1.7
SENP3Q9H4L4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SENP3Q9H4L4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SENP3Q9H4L4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SENP3Q9H4L4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SENP3Q9H4L4 SNORD45.2-201ENST00000363552 72 ntBASIC4.43□□□□□ -1.7
SENP3Q9H4L4 MIR22-201ENST00000362190 85 ntBASIC4.42□□□□□ -1.7
SENP3Q9H4L4 Y_RNA.206-201ENST00000364136 102 ntBASIC4.42□□□□□ -1.7
SENP3Q9H4L4 RNU6-995P-201ENST00000391244 107 ntBASIC4.42□□□□□ -1.7
SENP3Q9H4L4 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
SENP3Q9H4L4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SENP3Q9H4L4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SENP3Q9H4L4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SENP3Q9H4L4 SNORD15B-201ENST00000384714 146 ntBASIC4.41□□□□□ -1.7
SENP3Q9H4L4 MIR764-201ENST00000390811 85 ntBASIC4.41□□□□□ -1.7
SENP3Q9H4L4 SNORD111B-201ENST00000408587 80 ntBASIC4.41□□□□□ -1.7
SENP3Q9H4L4 AC079600.2-201ENST00000550076 130 ntBASIC4.41□□□□□ -1.7
SENP3Q9H4L4 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.41□□□□□ -1.7
SENP3Q9H4L4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SENP3Q9H4L4 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
SENP3Q9H4L4 MIR29B1-201ENST00000385015 81 ntBASIC4.4□□□□□ -1.71
SENP3Q9H4L4 Z96811.1-201ENST00000445880 108 ntBASIC4.4□□□□□ -1.71
SENP3Q9H4L4 MIR8063-201ENST00000621930 81 ntBASIC4.4□□□□□ -1.71
SENP3Q9H4L4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SENP3Q9H4L4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.39□□□□□ -1.71
SENP3Q9H4L4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
SENP3Q9H4L4 RNU7-154P-201ENST00000516194 62 ntBASIC4.39□□□□□ -1.71
SENP3Q9H4L4 MIR4738-201ENST00000579134 87 ntBASIC4.39□□□□□ -1.71
SENP3Q9H4L4 MIR548AE1-201ENST00000583292 70 ntBASIC4.39□□□□□ -1.71
SENP3Q9H4L4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.39□□□□□ -1.71
SENP3Q9H4L4 MIR125B1-201ENST00000385236 88 ntBASIC4.38□□□□□ -1.71
SENP3Q9H4L4 RNU6-165P-201ENST00000517170 99 ntBASIC4.38□□□□□ -1.71
SENP3Q9H4L4 MIR4529-201ENST00000578110 78 ntBASIC4.38□□□□□ -1.71
SENP3Q9H4L4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SENP3Q9H4L4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.38□□□□□ -1.71
SENP3Q9H4L4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SENP3Q9H4L4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SENP3Q9H4L4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SENP3Q9H4L4 AL603825.1-201ENST00000438481 80 ntBASIC4.37□□□□□ -1.71
SENP3Q9H4L4 MIR1-1-201ENST00000362147 71 ntBASIC4.36□□□□□ -1.71
SENP3Q9H4L4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC4.36□□□□□ -1.71
SENP3Q9H4L4 AC048334.1-201ENST00000477975 159 ntBASIC4.35□□□□□ -1.71
SENP3Q9H4L4 RNU6-469P-201ENST00000516253 101 ntBASIC4.35□□□□□ -1.71
SENP3Q9H4L4 RNA5SP402-201ENST00000517148 110 ntBASIC4.35□□□□□ -1.71
SENP3Q9H4L4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SENP3Q9H4L4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SENP3Q9H4L4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SENP3Q9H4L4 MIR30E-201ENST00000362104 92 ntBASIC4.34□□□□□ -1.71
SENP3Q9H4L4 Y_RNA.139-201ENST00000363464 102 ntBASIC4.34□□□□□ -1.71
SENP3Q9H4L4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SENP3Q9H4L4 RNU6-1326P-201ENST00000391262 107 ntBASIC4.34□□□□□ -1.71
SENP3Q9H4L4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
SENP3Q9H4L4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms