Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SNORA8.2-201ENST00000384372 139 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 SNORD67-201ENST00000390833 111 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 MIR1289-1-201ENST00000408836 144 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 RNU6-135P-201ENST00000516769 101 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 MIR4639-201ENST00000584938 69 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
RNF39Q9H2S5 RNU6-974P-201ENST00000384099 108 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 SNORA67.3-201ENST00000384366 140 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 RNU6-530P-201ENST00000391180 107 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 COTL1P1-201ENST00000422309 375 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 RNA5SP484-201ENST00000458857 111 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 MIR622-201ENST00000638396 96 ntBASIC3.37□□□□□ -1.87
RNF39Q9H2S5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF39Q9H2S5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF39Q9H2S5 SNORA80A-201ENST00000363922 136 ntBASIC3.36□□□□□ -1.87
RNF39Q9H2S5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.36□□□□□ -1.87
RNF39Q9H2S5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF39Q9H2S5 RNU6-726P-201ENST00000364680 107 ntBASIC3.35□□□□□ -1.87
RNF39Q9H2S5 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
RNF39Q9H2S5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RNF39Q9H2S5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF39Q9H2S5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF39Q9H2S5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RNF39Q9H2S5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RNF39Q9H2S5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF39Q9H2S5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF39Q9H2S5 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
RNF39Q9H2S5 RNU6-1047P-201ENST00000364418 107 ntBASIC3.34□□□□□ -1.87
RNF39Q9H2S5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF39Q9H2S5 MIR4644-201ENST00000579929 84 ntBASIC3.34□□□□□ -1.87
RNF39Q9H2S5 MIR5194-201ENST00000582634 120 ntBASIC3.34□□□□□ -1.87
RNF39Q9H2S5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RNF39Q9H2S5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF39Q9H2S5 MIR22-201ENST00000362190 85 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 MIR627-201ENST00000384979 97 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 RNU6-1267P-201ENST00000410747 107 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 HMGN1P18-201ENST00000457642 277 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 RNU6-1223P-201ENST00000517124 104 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 MIR3124-201ENST00000582636 67 ntBASIC3.33□□□□□ -1.88
RNF39Q9H2S5 MIR423-201ENST00000362201 94 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 MIR644A-201ENST00000385262 94 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC3.32□□□□□ -1.88
RNF39Q9H2S5 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 MIR6507-201ENST00000613630 70 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
RNF39Q9H2S5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF39Q9H2S5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
RNF39Q9H2S5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF39Q9H2S5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF39Q9H2S5 SNORA17.3-201ENST00000391159 129 ntBASIC3.31□□□□□ -1.88
RNF39Q9H2S5 RNU6-1262P-201ENST00000516217 96 ntBASIC3.31□□□□□ -1.88
RNF39Q9H2S5 RNA5SP470-201ENST00000516463 106 ntBASIC3.31□□□□□ -1.88
RNF39Q9H2S5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RNF39Q9H2S5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF39Q9H2S5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RNF39Q9H2S5 MIR100-201ENST00000385259 80 ntBASIC3.3□□□□□ -1.88
RNF39Q9H2S5 Z98941.1-201ENST00000407764 100 ntBASIC3.3□□□□□ -1.88
RNF39Q9H2S5 AC023827.1-201ENST00000569247 97 ntBASIC3.3□□□□□ -1.88
RNF39Q9H2S5 MIR548AE1-201ENST00000583292 70 ntBASIC3.3□□□□□ -1.88
RNF39Q9H2S5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF39Q9H2S5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF39Q9H2S5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF39Q9H2S5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF39Q9H2S5 RNU6-716P-201ENST00000365621 103 ntBASIC3.29□□□□□ -1.88
RNF39Q9H2S5 RMST_2.1-201ENST00000617263 136 ntBASIC3.29□□□□□ -1.88
RNF39Q9H2S5 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
RNF39Q9H2S5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF39Q9H2S5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RNF39Q9H2S5 MIR520F-201ENST00000384824 87 ntBASIC3.28□□□□□ -1.88
RNF39Q9H2S5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.28□□□□□ -1.88
RNF39Q9H2S5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF39Q9H2S5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.28□□□□□ -1.89
RNF39Q9H2S5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF39Q9H2S5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF39Q9H2S5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF39Q9H2S5 RNU7-193P-201ENST00000516723 65 ntBASIC3.27□□□□□ -1.89
RNF39Q9H2S5 MIR7106-201ENST00000612419 65 ntBASIC3.27□□□□□ -1.89
RNF39Q9H2S5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RNF39Q9H2S5 AC092427.1-202ENST00000430569 476 ntBASIC3.26□□□□□ -1.89
RNF39Q9H2S5 RNU6-469P-201ENST00000516253 101 ntBASIC3.26□□□□□ -1.89
RNF39Q9H2S5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF39Q9H2S5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
RNF39Q9H2S5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF39Q9H2S5 RNA5SP450-201ENST00000411206 102 ntBASIC3.25□□□□□ -1.89
RNF39Q9H2S5 SNORA70.14-201ENST00000516205 110 ntBASIC3.25□□□□□ -1.89
RNF39Q9H2S5 SNORA5B-201ENST00000363786 132 ntBASIC3.24□□□□□ -1.89
RNF39Q9H2S5 RNU6-439P-201ENST00000384188 106 ntBASIC3.24□□□□□ -1.89
RNF39Q9H2S5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF39Q9H2S5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF39Q9H2S5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF39Q9H2S5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF39Q9H2S5 SNORA75.2-201ENST00000391138 150 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms