Protein–RNA interactions for Protein: Q9BTD8

RBM42, RNA-binding protein 42, humanhuman

Known RBP Predictions only

Length 480 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42Q9BTD8 SNORD53-201ENST00000579969 78 ntBASIC3.49□□□□□ -1.85
RBM42Q9BTD8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RBM42Q9BTD8 SNORD115-24-201ENST00000363528 82 ntBASIC3.48□□□□□ -1.85
RBM42Q9BTD8 RNA5SP403-201ENST00000363598 108 ntBASIC3.48□□□□□ -1.85
RBM42Q9BTD8 MIR513A1-201ENST00000385138 129 ntBASIC3.48□□□□□ -1.85
RBM42Q9BTD8 MIR4771-2-201ENST00000577758 74 ntBASIC3.48□□□□□ -1.85
RBM42Q9BTD8 MIR4771-1-201ENST00000582617 74 ntBASIC3.48□□□□□ -1.85
RBM42Q9BTD8 MIR6733-201ENST00000635723 61 ntBASIC3.48□□□□□ -1.85
RBM42Q9BTD8 RNU1-148P-201ENST00000384472 162 ntBASIC3.47□□□□□ -1.85
RBM42Q9BTD8 RNU7-104P-201ENST00000459398 79 ntBASIC3.47□□□□□ -1.85
RBM42Q9BTD8 RNU7-161P-201ENST00000517289 62 ntBASIC3.47□□□□□ -1.85
RBM42Q9BTD8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.47□□□□□ -1.85
RBM42Q9BTD8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RBM42Q9BTD8 RNU6-360P-201ENST00000390944 104 ntBASIC3.46□□□□□ -1.86
RBM42Q9BTD8 RNU6-172P-201ENST00000411000 93 ntBASIC3.46□□□□□ -1.86
RBM42Q9BTD8 UBBP3-201ENST00000445497 241 ntBASIC3.46□□□□□ -1.86
RBM42Q9BTD8 SNORA31.11-201ENST00000516528 139 ntBASIC3.46□□□□□ -1.86
RBM42Q9BTD8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
RBM42Q9BTD8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RBM42Q9BTD8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.45□□□□□ -1.86
RBM42Q9BTD8 RNA5SP264-201ENST00000363115 107 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 RNA5SP100-201ENST00000410903 110 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 RNA5SP59-201ENST00000410922 110 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 RNA5SP24-201ENST00000516478 95 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.45□□□□□ -1.86
RBM42Q9BTD8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3.45□□□□□ -1.86
RBM42Q9BTD8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RBM42Q9BTD8 RNU6-934P-201ENST00000365154 107 ntBASIC3.44□□□□□ -1.86
RBM42Q9BTD8 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
RBM42Q9BTD8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.44□□□□□ -1.86
RBM42Q9BTD8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RBM42Q9BTD8 SNORA25.8-201ENST00000364831 128 ntBASIC3.43□□□□□ -1.86
RBM42Q9BTD8 MIR4635-201ENST00000583759 79 ntBASIC3.43□□□□□ -1.86
RBM42Q9BTD8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RBM42Q9BTD8 MIR26A1-201ENST00000362205 77 ntBASIC3.42□□□□□ -1.86
RBM42Q9BTD8 RNU6-822P-201ENST00000362707 106 ntBASIC3.42□□□□□ -1.86
RBM42Q9BTD8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.42□□□□□ -1.86
RBM42Q9BTD8 AL133373.1-201ENST00000497098 94 ntBASIC3.42□□□□□ -1.86
RBM42Q9BTD8 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
RBM42Q9BTD8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RBM42Q9BTD8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RBM42Q9BTD8 RNA5SP289-201ENST00000362332 137 ntBASIC3.41□□□□□ -1.86
RBM42Q9BTD8 SNORD1B-201ENST00000363091 84 ntBASIC3.41□□□□□ -1.86
RBM42Q9BTD8 U8.2-201ENST00000363156 134 ntBASIC3.41□□□□□ -1.86
RBM42Q9BTD8 MIR4506-201ENST00000584693 77 ntBASIC3.41□□□□□ -1.86
RBM42Q9BTD8 GHRLOS.1-201ENST00000610995 70 ntBASIC3.41□□□□□ -1.86
RBM42Q9BTD8 SNORA3.2-201ENST00000408221 125 ntBASIC3.4□□□□□ -1.87
RBM42Q9BTD8 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC3.4□□□□□ -1.87
RBM42Q9BTD8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.4□□□□□ -1.87
RBM42Q9BTD8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.4□□□□□ -1.87
RBM42Q9BTD8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RBM42Q9BTD8 MAPK10-266ENST00000641066 6555 ntBASIC3.39□□□□□ -1.87
RBM42Q9BTD8 SNORD114-30-201ENST00000364448 72 ntBASIC3.39□□□□□ -1.87
RBM42Q9BTD8 MIR527-201ENST00000385244 85 ntBASIC3.39□□□□□ -1.87
RBM42Q9BTD8 RNU1-123P-201ENST00000458950 160 ntBASIC3.39□□□□□ -1.87
RBM42Q9BTD8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBM42Q9BTD8 SNORA15B-2-201ENST00000384058 135 ntBASIC3.38□□□□□ -1.87
RBM42Q9BTD8 SNORA15B-1-201ENST00000384334 135 ntBASIC3.38□□□□□ -1.87
RBM42Q9BTD8 RNA5SP320-201ENST00000516263 124 ntBASIC3.38□□□□□ -1.87
RBM42Q9BTD8 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.38□□□□□ -1.87
RBM42Q9BTD8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBM42Q9BTD8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RBM42Q9BTD8 RNA5SP94-201ENST00000516917 108 ntBASIC3.37□□□□□ -1.87
RBM42Q9BTD8 MIR7843-201ENST00000622274 79 ntBASIC3.37□□□□□ -1.87
RBM42Q9BTD8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.36□□□□□ -1.87
RBM42Q9BTD8 Y_RNA.32-201ENST00000362589 110 ntBASIC3.36□□□□□ -1.87
RBM42Q9BTD8 Y_RNA.282-201ENST00000364793 102 ntBASIC3.36□□□□□ -1.87
RBM42Q9BTD8 RNU6-1008P-201ENST00000384160 104 ntBASIC3.36□□□□□ -1.87
RBM42Q9BTD8 MT-TY-201ENST00000387409 66 ntBASIC3.36□□□□□ -1.87
RBM42Q9BTD8 snoU13.26-201ENST00000459452 105 ntBASIC3.36□□□□□ -1.87
RBM42Q9BTD8 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
RBM42Q9BTD8 Y_RNA.74-201ENST00000362911 99 ntBASIC3.35□□□□□ -1.87
RBM42Q9BTD8 SNORD88.1-201ENST00000408684 91 ntBASIC3.35□□□□□ -1.87
RBM42Q9BTD8 Y_RNA.633-201ENST00000459107 95 ntBASIC3.35□□□□□ -1.87
RBM42Q9BTD8 RNA5SP282-201ENST00000516355 108 ntBASIC3.35□□□□□ -1.87
RBM42Q9BTD8 SNORA31.14-201ENST00000516728 116 ntBASIC3.35□□□□□ -1.87
RBM42Q9BTD8 MIR4460-201ENST00000577862 86 ntBASIC3.35□□□□□ -1.87
RBM42Q9BTD8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RBM42Q9BTD8 RNU7-102P-201ENST00000458948 62 ntBASIC3.34□□□□□ -1.87
RBM42Q9BTD8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC3.34□□□□□ -1.87
RBM42Q9BTD8 MIR3605-201ENST00000583214 100 ntBASIC3.34□□□□□ -1.87
RBM42Q9BTD8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RBM42Q9BTD8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RBM42Q9BTD8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RBM42Q9BTD8 RNU6-1204P-201ENST00000363948 107 ntBASIC3.33□□□□□ -1.88
RBM42Q9BTD8 MIR27B-201ENST00000385129 97 ntBASIC3.33□□□□□ -1.88
RBM42Q9BTD8 RNU6-721P-201ENST00000410155 105 ntBASIC3.33□□□□□ -1.88
RBM42Q9BTD8 MIR4676-201ENST00000583078 72 ntBASIC3.33□□□□□ -1.88
RBM42Q9BTD8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RBM42Q9BTD8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.32□□□□□ -1.88
RBM42Q9BTD8 SNORD114-4-201ENST00000363962 75 ntBASIC3.32□□□□□ -1.88
RBM42Q9BTD8 AL161935.2-201ENST00000414627 60 ntBASIC3.32□□□□□ -1.88
RBM42Q9BTD8 RNU6-246P-201ENST00000384702 107 ntBASIC3.31□□□□□ -1.88
RBM42Q9BTD8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RBM42Q9BTD8 RNU4-53P-201ENST00000410828 140 ntBASIC3.31□□□□□ -1.88
RBM42Q9BTD8 RNU6-250P-201ENST00000516958 103 ntBASIC3.31□□□□□ -1.88
RBM42Q9BTD8 AC067863.3-201ENST00000624172 122 ntBASIC3.31□□□□□ -1.88
RBM42Q9BTD8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms