Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNA5SP264-201ENST00000363115 107 ntBASIC1.54□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR520H-201ENST00000385126 88 ntBASIC1.54□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-165P-201ENST00000517170 99 ntBASIC1.54□□□□□ -2.16
CDK5RAP1Q96SZ6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
CDK5RAP1Q96SZ6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CDK5RAP1Q96SZ6 AC023934.1-201ENST00000574529 2389 ntBASIC1.54□□□□□ -2.16
CDK5RAP1Q96SZ6 Y_RNA.13-201ENST00000362403 112 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-330P-201ENST00000363015 107 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 MT-TF-201ENST00000387314 71 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 MT-TN-201ENST00000387400 73 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU6-466P-201ENST00000391224 103 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 AL357312.1-201ENST00000603879 298 ntBASIC1.53□□□□□ -2.16
CDK5RAP1Q96SZ6 RNU4-58P-201ENST00000363192 141 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.536-201ENST00000384621 113 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 AL133373.1-201ENST00000497098 94 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-1194P-201ENST00000516208 104 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-70P-201ENST00000516438 60 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU11-2P-201ENST00000516898 142 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-448P-201ENST00000517052 107 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR3140-201ENST00000583685 90 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 snoU13.31-201ENST00000607291 104 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 U6.100-201ENST00000636230 99 ntBASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-208P-201ENST00000362431 107 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR518E-201ENST00000385252 88 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 SNORD77.2-201ENST00000391045 68 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU7-185P-201ENST00000459215 60 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 SNORD92-201ENST00000585078 85 ntBASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.51□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-580P-201ENST00000365159 107 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR2113-201ENST00000459007 91 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 FGF7P7-201ENST00000514120 227 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-687P-201ENST00000516443 89 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 TRDV1-202ENST00000621643 102 ntBASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR101-2-201ENST00000362195 79 ntBASIC1.49□□□□□ -2.17
CDK5RAP1Q96SZ6 SNORD1A-201ENST00000364968 72 ntBASIC1.49□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-411P-201ENST00000384451 107 ntBASIC1.49□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.697-201ENST00000516776 113 ntBASIC1.49□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR4498-201ENST00000577599 66 ntBASIC1.49□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR377-201ENST00000362145 69 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.12-201ENST00000362393 112 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 RNA5SP245-201ENST00000364239 121 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR548U-201ENST00000390728 81 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-1052P-201ENST00000411398 104 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 AC092628.1-201ENST00000436250 252 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 AC048334.1-201ENST00000477975 159 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-719P-201ENST00000516671 104 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR4421-201ENST00000578133 69 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR6082-201ENST00000613604 109 ntBASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.371-201ENST00000365591 113 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR18B-201ENST00000454574 71 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 Y_RNA.809-201ENST00000516058 95 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDK5RAP1Q96SZ6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.207-201ENST00000364142 106 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORA25.9-201ENST00000365087 128 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-1051P-201ENST00000365471 102 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORA75.2-201ENST00000391138 150 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORA75.3-201ENST00000391231 150 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR1257-201ENST00000408490 117 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 AC023827.1-201ENST00000569247 97 ntBASIC1.46□□□□□ -2.18
CDK5RAP1Q96SZ6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR337-201ENST00000362281 93 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 SNORD115-31-201ENST00000365318 82 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-540P-201ENST00000384622 101 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 AC074348.1-201ENST00000426503 132 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 MIR4696-201ENST00000581431 70 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDK5RAP1Q96SZ6 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
CDK5RAP1Q96SZ6 AC079140.2-201ENST00000506193 142 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms