Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR337-201ENST00000362281 93 ntBASIC2.15□□□□□ -2.07
CCDC116Q8IYX3 SNORD45A-201ENST00000384512 84 ntBASIC2.15□□□□□ -2.07
CCDC116Q8IYX3 MIR4299-201ENST00000577899 72 ntBASIC2.15□□□□□ -2.07
CCDC116Q8IYX3 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
CCDC116Q8IYX3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC116Q8IYX3 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
CCDC116Q8IYX3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 AC093423.1-201ENST00000440817 142 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 snoU13.15-201ENST00000459407 104 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 AC036111.3-201ENST00000526389 112 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 MIR3937-201ENST00000580135 106 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 AL645939.4-201ENST00000604495 135 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 AC103810.8-201ENST00000607347 118 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.14□□□□□ -2.07
CCDC116Q8IYX3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 SNORD45.1-201ENST00000363181 77 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 RNU6-482P-201ENST00000391068 107 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 RNU6-630P-201ENST00000391258 106 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 RNA5SP247-201ENST00000411181 105 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 HMGN2P19-201ENST00000425149 265 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 HMGN2P23-201ENST00000456759 269 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 MIR8053-201ENST00000613344 75 ntBASIC2.13□□□□□ -2.07
CCDC116Q8IYX3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 RNA5SP245-201ENST00000364239 121 ntBASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 RNU6-535P-201ENST00000384722 107 ntBASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 RNU6-881P-201ENST00000516813 102 ntBASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC116Q8IYX3 SNORD33-201ENST00000362761 85 ntBASIC2.11□□□□□ -2.07
CCDC116Q8IYX3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC116Q8IYX3 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
CCDC116Q8IYX3 MIR4448-201ENST00000584360 86 ntBASIC2.11□□□□□ -2.07
CCDC116Q8IYX3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 SNORD115-22-201ENST00000364456 82 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 Y_RNA.443-201ENST00000384135 111 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 MIR30A-201ENST00000385092 71 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 SNORA75.2-201ENST00000391138 150 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 SNORA75.3-201ENST00000391231 150 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 AC048334.1-201ENST00000477975 159 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 RNU6-1057P-201ENST00000517162 102 ntBASIC2.1□□□□□ -2.07
CCDC116Q8IYX3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 SNORA25.4-201ENST00000363666 124 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 RNU6-1177P-201ENST00000391058 104 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 RPS26P5-201ENST00000418544 335 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 RNU7-40P-201ENST00000516397 64 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 AL512310.8-201ENST00000550183 120 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 MIR4676-201ENST00000583078 72 ntBASIC2.09□□□□□ -2.07
CCDC116Q8IYX3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 RNU6-364P-201ENST00000384387 107 ntBASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 MIR9-2-201ENST00000384838 87 ntBASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 RNU4-53P-201ENST00000410828 140 ntBASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 MIR4773-1-201ENST00000637203 78 ntBASIC2.08□□□□□ -2.08
CCDC116Q8IYX3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 RNU6-604P-201ENST00000390917 100 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 SNORD111-201ENST00000408139 94 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 AC244505.6-201ENST00000452829 130 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 RNU6-287P-201ENST00000516230 98 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 AC008608.1-201ENST00000603910 127 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 AC106800.4-201ENST00000614905 153 ntBASIC2.07□□□□□ -2.08
CCDC116Q8IYX3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 U3.27-201ENST00000391237 200 ntBASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 AL603825.1-201ENST00000438481 80 ntBASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 RNU6-274P-201ENST00000459566 107 ntBASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 SNORA44.1-201ENST00000517031 108 ntBASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 AC023827.1-201ENST00000569247 97 ntBASIC2.06□□□□□ -2.08
CCDC116Q8IYX3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CCDC116Q8IYX3 RNU6-382P-201ENST00000365181 106 ntBASIC2.05□□□□□ -2.08
CCDC116Q8IYX3 MIR938-201ENST00000401216 83 ntBASIC2.05□□□□□ -2.08
CCDC116Q8IYX3 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
CCDC116Q8IYX3 AC027335.2-201ENST00000624030 375 ntBASIC2.05□□□□□ -2.08
CCDC116Q8IYX3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 RNU6-1216P-201ENST00000362590 107 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 SNORD113.1-201ENST00000363280 73 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 Y_RNA.258-201ENST00000364613 105 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 SNORD116-24-201ENST00000384549 92 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 SNORA3.2-201ENST00000408221 125 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 RNU7-102P-201ENST00000458948 62 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 SNORA31.2-201ENST00000516019 134 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 RNU6-752P-201ENST00000516376 102 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC116Q8IYX3 SNORD115-44-201ENST00000365391 82 ntBASIC2.03□□□□□ -2.08
CCDC116Q8IYX3 Y_RNA.363-201ENST00000365529 113 ntBASIC2.03□□□□□ -2.08
CCDC116Q8IYX3 MTND4LP19-201ENST00000403051 166 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms