Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RETREG3Q86VR2 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 AC008608.1-201ENST00000603910 127 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 U6.81-201ENST00000612550 106 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 AC027335.2-201ENST00000624030 375 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
RETREG3Q86VR2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNU6-824P-201ENST00000363724 104 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 SNORA24B-201ENST00000384176 131 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNU6-994P-201ENST00000410507 111 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 AL591704.2-201ENST00000421658 181 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNU7-102P-201ENST00000458948 62 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNA5SP148-201ENST00000516527 94 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 MIR3198-2-201ENST00000577868 80 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.16□□□□□ -2.06
RETREG3Q86VR2 Y_RNA.205-201ENST00000364128 113 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 RNU6-895P-201ENST00000384125 103 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 MIR4298-201ENST00000584380 73 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RETREG3Q86VR2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
RETREG3Q86VR2 Y_RNA.363-201ENST00000365529 113 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 MIR934-201ENST00000401241 83 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RETREG3Q86VR2 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RETREG3Q86VR2 AC244505.6-201ENST00000452829 130 ntBASIC2.13□□□□□ -2.07
RETREG3Q86VR2 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
RETREG3Q86VR2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNU6-287P-201ENST00000516230 98 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNU6-977P-201ENST00000516411 103 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNA5SP24-201ENST00000516478 95 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.12□□□□□ -2.07
RETREG3Q86VR2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
RETREG3Q86VR2 SNORD45.1-201ENST00000363181 77 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 SNORD115-44-201ENST00000365391 82 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 SNORD45A-201ENST00000384512 84 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU6-1177P-201ENST00000391058 104 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 U3.27-201ENST00000391237 200 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU7-21P-201ENST00000459430 62 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR4804-201ENST00000581683 73 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR8053-201ENST00000613344 75 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR4773-1-201ENST00000637203 78 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR337-201ENST00000362281 93 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 SNORA80D-201ENST00000384488 135 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU1-119P-201ENST00000391122 165 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 MIR2113-201ENST00000459007 91 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU6-274P-201ENST00000459566 107 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL429P-201ENST00000479090 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL489P-201ENST00000486185 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL327P-201ENST00000488659 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 MIR4422-201ENST00000581938 83 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL853P-201ENST00000617250 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 MIR100-201ENST00000385259 80 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 RNU6-910P-201ENST00000390844 107 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 RNU7-90P-201ENST00000459216 62 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 RNU7-13P-201ENST00000516413 62 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNU6-471P-201ENST00000383944 106 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 AC093423.1-201ENST00000440817 142 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNU6-881P-201ENST00000516813 102 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNU6-369P-201ENST00000362515 102 ntBASIC2.07□□□□□ -2.08
RETREG3Q86VR2 RNU6-630P-201ENST00000391258 106 ntBASIC2.07□□□□□ -2.08
RETREG3Q86VR2 AC005520.4-201ENST00000604337 90 ntBASIC2.07□□□□□ -2.08
RETREG3Q86VR2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RETREG3Q86VR2 RNU7-56P-201ENST00000458744 62 ntBASIC2.06□□□□□ -2.08
RETREG3Q86VR2 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
RETREG3Q86VR2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RETREG3Q86VR2 MIR1-1-201ENST00000362147 71 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 RNU6-382P-201ENST00000365181 106 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 AC008834.1-201ENST00000511612 175 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 AL078603.1-201ENST00000603824 313 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RETREG3Q86VR2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RETREG3Q86VR2 Y_RNA.32-201ENST00000362589 110 ntBASIC2.04□□□□□ -2.08
RETREG3Q86VR2 SNORD115-22-201ENST00000364456 82 ntBASIC2.04□□□□□ -2.08
RETREG3Q86VR2 MIR520F-201ENST00000384824 87 ntBASIC2.04□□□□□ -2.08
RETREG3Q86VR2 RNU6-604P-201ENST00000390917 100 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 204.5 ms