Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 MIR4536-1-201ENST00000583537 88 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 AC022079.1-201ENST00000621546 602 ntBASIC-1.47□□□□□ -2.64
CSPG4Q6UVK1 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNU6-987P-201ENST00000384759 104 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNY3P10-201ENST00000384764 102 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 MIR548Q-201ENST00000408404 100 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNU6-764P-201ENST00000516396 105 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 MIR4528-201ENST00000577763 90 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 AL365265.1-201ENST00000621045 234 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNU6-593P-201ENST00000364716 112 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 MIR624-201ENST00000385217 97 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 U3.27-201ENST00000391237 200 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 HSPE1P25-201ENST00000455484 251 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 RNU6-570P-201ENST00000517051 105 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 AC005899.2-201ENST00000584353 90 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 DEFB117-201ENST00000602356 141 ntBASIC-1.48□□□□□ -2.65
CSPG4Q6UVK1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 SCARNA15-202ENST00000516881 127 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 U6.96-201ENST00000636425 70 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 MIR367-201ENST00000362299 68 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 RNU6-990P-201ENST00000364385 104 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 RNU6-191P-201ENST00000516295 94 ntBASIC-1.49□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 RNU4-24P-201ENST00000364565 139 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 AC138393.2-201ENST00000414742 246 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 MIR376A1-201ENST00000616574 68 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 SEPT14P3-201ENST00000439401 183 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 AL732372.2-207ENST00000445840 183 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 SEPT14P2-201ENST00000453405 183 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 FO082796.1-201ENST00000523795 183 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 MTATP6P25-201ENST00000574491 261 ntBASIC-1.5□□□□□ -2.65
CSPG4Q6UVK1 RNU6-230P-201ENST00000362457 104 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 RNU6-306P-201ENST00000384617 107 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 MIR203A-201ENST00000384836 110 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 RNU6-373P-201ENST00000411247 98 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 Z83846.1-201ENST00000446798 265 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 RNU6-75P-201ENST00000515944 104 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 MIR3657-201ENST00000584818 117 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 AL731563.1-201ENST00000442202 214 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 U8.20-201ENST00000459445 131 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 MIR5683-201ENST00000636514 76 ntBASIC-1.51□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 MIR513B-201ENST00000385136 84 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 RNA5SP147-201ENST00000516493 109 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 RNU2-4P-201ENST00000606190 192 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 AC005014.2-201ENST00000607795 599 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 AC090617.10-201ENST00000624308 134 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 U6.106-201ENST00000636360 105 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 AC009161.1-201ENST00000417306 376 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 RNU6-507P-201ENST00000516045 100 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 SNORD113-5-201ENST00000607261 78 ntBASIC-1.52□□□□□ -2.65
CSPG4Q6UVK1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
CSPG4Q6UVK1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.53□□□□□ -2.65
CSPG4Q6UVK1 AC018645.2-201ENST00000609151 472 ntBASIC-1.53□□□□□ -2.65
CSPG4Q6UVK1 SNORD115-19-201ENST00000363098 82 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 SNORD115-18-201ENST00000363293 82 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 SNORD115-17-201ENST00000364612 82 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 RNU6-248P-201ENST00000410720 107 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.54□□□□□ -2.66
CSPG4Q6UVK1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms