Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.88□□□□□ -2.87
CKS1BP61024 RNU6-118P-201ENST00000516552 102 ntBASIC-2.88□□□□□ -2.87
CKS1BP61024 MIR34C-201ENST00000384831 77 ntBASIC-2.89□□□□□ -2.87
CKS1BP61024 MIR616-201ENST00000385293 97 ntBASIC-2.89□□□□□ -2.87
CKS1BP61024 AL078595.1-201ENST00000404458 226 ntBASIC-2.89□□□□□ -2.87
CKS1BP61024 RNU6-720P-201ENST00000516363 108 ntBASIC-2.89□□□□□ -2.87
CKS1BP61024 SNORD116-25-201ENST00000516517 92 ntBASIC-2.89□□□□□ -2.87
CKS1BP61024 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.89□□□□□ -2.87
CKS1BP61024 RPS29P30-201ENST00000600975 111 ntBASIC-2.89□□□□□ -2.87
CKS1BP61024 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.9□□□□□ -2.87
CKS1BP61024 MIR4756-201ENST00000577874 78 ntBASIC-2.9□□□□□ -2.87
CKS1BP61024 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.91□□□□□ -2.88
CKS1BP61024 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.91□□□□□ -2.88
CKS1BP61024 MIR451A-201ENST00000385059 72 ntBASIC-2.91□□□□□ -2.88
CKS1BP61024 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.91□□□□□ -2.88
CKS1BP61024 AC109635.3-201ENST00000529536 185 ntBASIC-2.91□□□□□ -2.88
CKS1BP61024 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.91□□□□□ -2.88
CKS1BP61024 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 RNU6-647P-201ENST00000364243 107 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 RNU6-510P-201ENST00000391239 108 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 MIR548H3-201ENST00000408771 118 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 RNU4-43P-201ENST00000410628 137 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 AC138393.2-201ENST00000414742 246 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 HSPE1P25-201ENST00000455484 251 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 snoU18.1-201ENST00000629629 71 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 MIR4272-201ENST00000635924 64 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 AC073869.6-201ENST00000640656 341 ntBASIC-2.92□□□□□ -2.88
CKS1BP61024 SNORD113-8-201ENST00000363497 74 ntBASIC-2.93□□□□□ -2.88
CKS1BP61024 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.93□□□□□ -2.88
CKS1BP61024 RNU6-978P-201ENST00000364371 103 ntBASIC-2.93□□□□□ -2.88
CKS1BP61024 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.93□□□□□ -2.88
CKS1BP61024 U6.96-201ENST00000636425 70 ntBASIC-2.93□□□□□ -2.88
CKS1BP61024 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.94□□□□□ -2.88
CKS1BP61024 RNU4-90P-201ENST00000362773 141 ntBASIC-2.94□□□□□ -2.88
CKS1BP61024 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.94□□□□□ -2.88
CKS1BP61024 RNU6-890P-201ENST00000384121 107 ntBASIC-2.94□□□□□ -2.88
CKS1BP61024 RNU6-662P-201ENST00000384253 104 ntBASIC-2.94□□□□□ -2.88
CKS1BP61024 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.94□□□□□ -2.88
CKS1BP61024 RNU6-616P-201ENST00000384353 107 ntBASIC-2.95□□□□□ -2.88
CKS1BP61024 RNU6-102P-201ENST00000384485 104 ntBASIC-2.95□□□□□ -2.88
CKS1BP61024 RNU6-310P-201ENST00000384655 107 ntBASIC-2.95□□□□□ -2.88
CKS1BP61024 DEFB108C-201ENST00000400154 252 ntBASIC-2.95□□□□□ -2.88
CKS1BP61024 RNU6-453P-201ENST00000516819 85 ntBASIC-2.95□□□□□ -2.88
CKS1BP61024 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.96□□□□□ -2.88
CKS1BP61024 RNU6-1119P-201ENST00000384349 108 ntBASIC-2.96□□□□□ -2.88
CKS1BP61024 MTATP6P19-201ENST00000413797 659 ntBASIC-2.96□□□□□ -2.88
CKS1BP61024 RNU7-164P-201ENST00000459221 62 ntBASIC-2.96□□□□□ -2.88
CKS1BP61024 AC021443.1-201ENST00000604478 211 ntBASIC-2.96□□□□□ -2.88
CKS1BP61024 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.96□□□□□ -2.88
CKS1BP61024 FGF7P6-202ENST00000451282 293 ntBASIC-2.97□□□□□ -2.88
CKS1BP61024 AC119751.7-201ENST00000600494 245 ntBASIC-2.97□□□□□ -2.88
CKS1BP61024 SNORD75.2-201ENST00000408784 58 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 AL353691.2-201ENST00000443795 59 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 RNU7-123P-201ENST00000515911 60 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 RNU6-980P-201ENST00000516925 103 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 AC138907.4-201ENST00000570107 226 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 AC108081.1-201ENST00000604358 221 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 AL138825.1-201ENST00000618587 192 ntBASIC-2.98□□□□□ -2.89
CKS1BP61024 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.99□□□□□ -2.89
CKS1BP61024 SNORA25.1-201ENST00000362326 128 ntBASIC-3□□□□□ -2.89
CKS1BP61024 Y_RNA.284-201ENST00000364806 102 ntBASIC-3□□□□□ -2.89
CKS1BP61024 MIR507-201ENST00000385234 94 ntBASIC-3□□□□□ -2.89
CKS1BP61024 RNA5SP236-201ENST00000516169 116 ntBASIC-3□□□□□ -2.89
CKS1BP61024 RNU6-561P-201ENST00000516222 102 ntBASIC-3□□□□□ -2.89
CKS1BP61024 AC084782.3-201ENST00000612282 578 ntBASIC-3□□□□□ -2.89
CKS1BP61024 Y_RNA.117-201ENST00000363294 101 ntBASIC-3.01□□□□□ -2.89
CKS1BP61024 SNORD115-22-201ENST00000364456 82 ntBASIC-3.01□□□□□ -2.89
CKS1BP61024 AC006362.1-201ENST00000567392 174 ntBASIC-3.01□□□□□ -2.89
CKS1BP61024 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.01□□□□□ -2.89
CKS1BP61024 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.01□□□□□ -2.89
CKS1BP61024 Y_RNA.103-201ENST00000363171 102 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 RNU6-211P-201ENST00000384047 107 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 RNU6-400P-201ENST00000391173 106 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 Y_RNA.602-201ENST00000410535 92 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 SNORD54-201ENST00000459159 67 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 RNU6-1333P-201ENST00000516162 93 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 AC103591.3-201ENST00000608684 209 ntBASIC-3.02□□□□□ -2.89
CKS1BP61024 Y_RNA.402-201ENST00000383972 102 ntBASIC-3.03□□□□□ -2.89
CKS1BP61024 AC037487.3-201ENST00000606668 112 ntBASIC-3.03□□□□□ -2.89
CKS1BP61024 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-3.03□□□□□ -2.89
CKS1BP61024 Y_RNA.5-201ENST00000362334 102 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 MIR559-201ENST00000385188 96 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 RNU6-130P-201ENST00000411112 103 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 RNU6-240P-201ENST00000516098 97 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 SNORA40.14-201ENST00000516543 86 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 AP002392.1-201ENST00000537692 208 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 MIR5690-201ENST00000583739 73 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 AC090617.8-201ENST00000623339 167 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 AC090582.1-201ENST00000636321 199 ntBASIC-3.04□□□□□ -2.9
CKS1BP61024 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-3.05□□□□□ -2.9
CKS1BP61024 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.05□□□□□ -2.9
CKS1BP61024 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.05□□□□□ -2.9
CKS1BP61024 MIR3139-201ENST00000579145 76 ntBASIC-3.05□□□□□ -2.9
CKS1BP61024 MIR376A1-201ENST00000616574 68 ntBASIC-3.05□□□□□ -2.9
CKS1BP61024 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.06□□□□□ -2.9
CKS1BP61024 Y_RNA.633-201ENST00000459107 95 ntBASIC-3.06□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms