Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MIR3126-201ENST00000577443 74 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 MIR3920-201ENST00000581751 86 ntBASIC1.54□□□□□ -2.16
HMGA2P52926 Y_RNA.13-201ENST00000362403 112 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-403P-201ENST00000363163 104 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-580P-201ENST00000365159 107 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-396P-201ENST00000365369 105 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-936P-201ENST00000384005 107 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 MIR627-201ENST00000384979 97 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-1177P-201ENST00000391058 104 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNA5SP465-201ENST00000391195 109 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 SNORD93-201ENST00000408813 74 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-935P-201ENST00000410371 100 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 RNU6-922P-201ENST00000516753 99 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 Y_RNA.722-201ENST00000517279 114 ntBASIC1.53□□□□□ -2.16
HMGA2P52926 SNORA25.5-201ENST00000363782 126 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 RNU6-1184P-201ENST00000384588 108 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 MT-TN-201ENST00000387400 73 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGA2P52926 AC244098.3-201ENST00000424803 96 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 SNORA40.17-201ENST00000517256 115 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 MIR4648-201ENST00000580107 72 ntBASIC1.52□□□□□ -2.17
HMGA2P52926 Y_RNA.56-201ENST00000362798 112 ntBASIC1.51□□□□□ -2.17
HMGA2P52926 RNU6-360P-201ENST00000390944 104 ntBASIC1.51□□□□□ -2.17
HMGA2P52926 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGA2P52926 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
HMGA2P52926 SNORA75.1-201ENST00000391130 148 ntBASIC1.5□□□□□ -2.17
HMGA2P52926 MIR4658-201ENST00000584344 65 ntBASIC1.5□□□□□ -2.17
HMGA2P52926 MIR449A-201ENST00000362113 91 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 MIR101-2-201ENST00000362195 79 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 MIR203A-201ENST00000384836 110 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 MIR599-201ENST00000385069 95 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 RNA5SP450-201ENST00000411206 102 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 RNU7-185P-201ENST00000459215 60 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 RNU6-287P-201ENST00000516230 98 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 RNU6-250P-201ENST00000516958 103 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 NAMPTP3-201ENST00000569273 224 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 MIR548H5-201ENST00000580314 60 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 MIR548AG2-201ENST00000581228 64 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 MIR6082-201ENST00000613604 109 ntBASIC1.49□□□□□ -2.17
HMGA2P52926 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HMGA2P52926 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
HMGA2P52926 MIR377-201ENST00000362145 69 ntBASIC1.48□□□□□ -2.17
HMGA2P52926 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
HMGA2P52926 AC097635.1-201ENST00000450678 155 ntBASIC1.48□□□□□ -2.17
HMGA2P52926 SCARNA21.1-201ENST00000515996 128 ntBASIC1.48□□□□□ -2.17
HMGA2P52926 RNU6-752P-201ENST00000516376 102 ntBASIC1.48□□□□□ -2.17
HMGA2P52926 RNU6-542P-201ENST00000516405 103 ntBASIC1.48□□□□□ -2.17
HMGA2P52926 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGA2P52926 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HMGA2P52926 RNU6-495P-201ENST00000362995 107 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNU6-53P-201ENST00000365367 106 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 MIR513A1-201ENST00000385138 129 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 MIR524-201ENST00000385242 87 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNU4-88P-201ENST00000411220 86 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 MIR18B-201ENST00000454574 71 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNU6-274P-201ENST00000459566 107 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNU6-322P-201ENST00000516010 103 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 MIR2115-201ENST00000516657 100 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNU6-1057P-201ENST00000517162 102 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 AL078603.1-201ENST00000603824 313 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 AC084768.2-201ENST00000622736 221 ntBASIC1.47□□□□□ -2.17
HMGA2P52926 RNU6-668P-201ENST00000364180 107 ntBASIC1.46□□□□□ -2.18
HMGA2P52926 RNU6-1039P-201ENST00000383931 107 ntBASIC1.46□□□□□ -2.18
HMGA2P52926 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
HMGA2P52926 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
HMGA2P52926 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGA2P52926 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGA2P52926 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
HMGA2P52926 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HMGA2P52926 SNORD75.2-201ENST00000408784 58 ntBASIC1.45□□□□□ -2.18
HMGA2P52926 RNA5SP508-201ENST00000411327 119 ntBASIC1.45□□□□□ -2.18
HMGA2P52926 SNORD83.1-201ENST00000411362 77 ntBASIC1.45□□□□□ -2.18
HMGA2P52926 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGA2P52926 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
HMGA2P52926 AC073869.9-201ENST00000641610 120 ntBASIC1.45□□□□□ -2.18
HMGA2P52926 RNA5SP264-201ENST00000363115 107 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 RNU6-940P-201ENST00000363433 104 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 RNU6-645P-201ENST00000364649 106 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 RNA5SP299-201ENST00000391203 116 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 SNORD42B-201ENST00000458893 67 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 RNU6-656P-201ENST00000516785 107 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 MIR3938-201ENST00000582157 103 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.44□□□□□ -2.18
HMGA2P52926 RNU6-1312P-201ENST00000362425 108 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 MIR583-201ENST00000384846 75 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 RNU6-808P-201ENST00000391233 108 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 U3.27-201ENST00000391237 200 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 RNU7-24P-201ENST00000458867 62 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 AL133373.1-201ENST00000497098 94 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 RNU6-947P-201ENST00000516264 106 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 RNU6-122P-201ENST00000516818 107 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 SNORA31.25-201ENST00000517242 134 ntBASIC1.43□□□□□ -2.18
HMGA2P52926 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 258.2 ms