Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 MIR8087-201ENST00000612745 78 ntBASIC0.11□□□□□ -2.39
FEN1P39748 MIR6779-201ENST00000617283 64 ntBASIC0.11□□□□□ -2.39
FEN1P39748 AL162376.1-201ENST00000624117 175 ntBASIC0.11□□□□□ -2.39
FEN1P39748 MIR330-201ENST00000362196 94 ntBASIC0.1□□□□□ -2.39
FEN1P39748 RNU6-170P-201ENST00000362832 104 ntBASIC0.1□□□□□ -2.39
FEN1P39748 RNU6-571P-201ENST00000384128 107 ntBASIC0.1□□□□□ -2.39
FEN1P39748 MIR548D2-201ENST00000384955 97 ntBASIC0.1□□□□□ -2.39
FEN1P39748 SNORD41.1-201ENST00000391000 69 ntBASIC0.1□□□□□ -2.39
FEN1P39748 RNU7-106P-201ENST00000459514 67 ntBASIC0.1□□□□□ -2.39
FEN1P39748 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
FEN1P39748 Y_RNA.343-201ENST00000365354 112 ntBASIC0.09□□□□□ -2.4
FEN1P39748 MIR7-2-201ENST00000384970 110 ntBASIC0.09□□□□□ -2.4
FEN1P39748 MIR1197-201ENST00000408818 88 ntBASIC0.09□□□□□ -2.4
FEN1P39748 SNORA7.5-201ENST00000410672 110 ntBASIC0.09□□□□□ -2.4
FEN1P39748 RPL39P34-201ENST00000477141 156 ntBASIC0.09□□□□□ -2.4
FEN1P39748 Y_RNA.809-201ENST00000516058 95 ntBASIC0.09□□□□□ -2.4
FEN1P39748 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
FEN1P39748 RNU6-346P-201ENST00000516288 111 ntBASIC0.09□□□□□ -2.4
FEN1P39748 RNU6-1061P-201ENST00000516530 99 ntBASIC0.09□□□□□ -2.4
FEN1P39748 RNU6-850P-201ENST00000516934 103 ntBASIC0.09□□□□□ -2.4
FEN1P39748 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
FEN1P39748 AC025166.1-201ENST00000612411 163 ntBASIC0.09□□□□□ -2.4
FEN1P39748 SNORD58C-201ENST00000365223 64 ntBASIC0.08□□□□□ -2.4
FEN1P39748 RNA5SP128-201ENST00000365305 116 ntBASIC0.08□□□□□ -2.4
FEN1P39748 Y_RNA.362-201ENST00000365518 110 ntBASIC0.08□□□□□ -2.4
FEN1P39748 SNORD38.2-201ENST00000384470 69 ntBASIC0.08□□□□□ -2.4
FEN1P39748 Y_RNA.506-201ENST00000384494 102 ntBASIC0.08□□□□□ -2.4
FEN1P39748 Y_RNA.568-201ENST00000384742 113 ntBASIC0.08□□□□□ -2.4
FEN1P39748 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
FEN1P39748 Y_RNA.35-201ENST00000362601 101 ntBASIC0.07□□□□□ -2.4
FEN1P39748 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
FEN1P39748 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
FEN1P39748 Y_RNA.342-201ENST00000365352 113 ntBASIC0.07□□□□□ -2.4
FEN1P39748 SNORA40-201ENST00000388090 126 ntBASIC0.07□□□□□ -2.4
FEN1P39748 RNU6-127P-201ENST00000390897 107 ntBASIC0.07□□□□□ -2.4
FEN1P39748 RNU6-269P-201ENST00000391077 97 ntBASIC0.07□□□□□ -2.4
FEN1P39748 RNU6-257P-201ENST00000410238 98 ntBASIC0.07□□□□□ -2.4
FEN1P39748 RNA5SP330-201ENST00000517096 96 ntBASIC0.07□□□□□ -2.4
FEN1P39748 MTND5P40-201ENST00000559945 246 ntBASIC0.07□□□□□ -2.4
FEN1P39748 SNORA70.25-201ENST00000612741 95 ntBASIC0.07□□□□□ -2.4
FEN1P39748 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
FEN1P39748 MIR499B-201ENST00000636498 73 ntBASIC0.07□□□□□ -2.4
FEN1P39748 AL512310.12-203ENST00000640543 90 ntBASIC0.07□□□□□ -2.4
FEN1P39748 MTND5P18-201ENST00000445624 1801 ntBASIC0.06□□□□□ -2.4
FEN1P39748 RNU6-363P-201ENST00000362895 105 ntBASIC0.06□□□□□ -2.4
FEN1P39748 RNU6-1260P-201ENST00000362944 107 ntBASIC0.06□□□□□ -2.4
FEN1P39748 RNY4P6-201ENST00000363667 96 ntBASIC0.06□□□□□ -2.4
FEN1P39748 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
FEN1P39748 Y_RNA.258-201ENST00000364613 105 ntBASIC0.06□□□□□ -2.4
FEN1P39748 Y_RNA.344-201ENST00000365381 112 ntBASIC0.06□□□□□ -2.4
FEN1P39748 RNY1P5-201ENST00000383890 115 ntBASIC0.05□□□□□ -2.4
FEN1P39748 RNU6-524P-201ENST00000384270 107 ntBASIC0.05□□□□□ -2.4
FEN1P39748 MIR516A2-201ENST00000384888 90 ntBASIC0.05□□□□□ -2.4
FEN1P39748 MIR516A1-201ENST00000385033 90 ntBASIC0.05□□□□□ -2.4
FEN1P39748 RNU6-1265P-201ENST00000516342 103 ntBASIC0.05□□□□□ -2.4
FEN1P39748 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
FEN1P39748 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.05□□□□□ -2.4
FEN1P39748 RNU6-1313P-201ENST00000362622 102 ntBASIC0.04□□□□□ -2.4
FEN1P39748 Y_RNA.323-201ENST00000365157 109 ntBASIC0.04□□□□□ -2.4
FEN1P39748 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
FEN1P39748 Y_RNA.630-201ENST00000411370 108 ntBASIC0.04□□□□□ -2.4
FEN1P39748 AL353813.1-201ENST00000440700 253 ntBASIC0.04□□□□□ -2.4
FEN1P39748 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.04□□□□□ -2.4
FEN1P39748 RNU6-1006P-201ENST00000516998 103 ntBASIC0.04□□□□□ -2.4
FEN1P39748 MIR5706-201ENST00000579841 80 ntBASIC0.04□□□□□ -2.4
FEN1P39748 MIR3920-201ENST00000581751 86 ntBASIC0.04□□□□□ -2.4
FEN1P39748 Y_RNA.155-201ENST00000363632 101 ntBASIC0.03□□□□□ -2.4
FEN1P39748 RNU6-1211P-201ENST00000459179 105 ntBASIC0.03□□□□□ -2.4
FEN1P39748 AC073869.9-201ENST00000641610 120 ntBASIC0.03□□□□□ -2.4
FEN1P39748 Y_RNA.247-201ENST00000364500 92 ntBASIC0.02□□□□□ -2.41
FEN1P39748 Y_RNA.346-201ENST00000365385 112 ntBASIC0.02□□□□□ -2.41
FEN1P39748 RNU6-409P-201ENST00000384114 104 ntBASIC0.02□□□□□ -2.41
FEN1P39748 Y_RNA.507-201ENST00000384500 99 ntBASIC0.02□□□□□ -2.41
FEN1P39748 RNA5SP63-201ENST00000391225 112 ntBASIC0.02□□□□□ -2.41
FEN1P39748 SPINT5P-201ENST00000448174 155 ntBASIC0.02□□□□□ -2.41
FEN1P39748 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.02□□□□□ -2.41
FEN1P39748 RNU6-772P-201ENST00000516042 105 ntBASIC0.02□□□□□ -2.41
FEN1P39748 RNU7-13P-201ENST00000516413 62 ntBASIC0.02□□□□□ -2.41
FEN1P39748 RNU6-1018P-201ENST00000516577 106 ntBASIC0.02□□□□□ -2.41
FEN1P39748 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.02□□□□□ -2.41
FEN1P39748 Y_RNA.115-201ENST00000363272 98 ntBASIC0.01□□□□□ -2.41
FEN1P39748 SNORD38.1-201ENST00000363863 68 ntBASIC0.01□□□□□ -2.41
FEN1P39748 MIR539-201ENST00000365690 78 ntBASIC0.01□□□□□ -2.41
FEN1P39748 MIR610-201ENST00000385139 96 ntBASIC0.01□□□□□ -2.41
FEN1P39748 MIR501-201ENST00000390204 84 ntBASIC0.01□□□□□ -2.41
FEN1P39748 MIR3668-201ENST00000582138 75 ntBASIC0.01□□□□□ -2.41
FEN1P39748 RNU6-90P-201ENST00000606352 106 ntBASIC0.01□□□□□ -2.41
FEN1P39748 uc_338.28-201ENST00000612082 187 ntBASIC0.01□□□□□ -2.41
FEN1P39748 RNA5SP325-201ENST00000363756 130 ntBASIC0□□□□□ -2.41
FEN1P39748 RNU6-816P-201ENST00000390914 107 ntBASIC0□□□□□ -2.41
FEN1P39748 RNU6-907P-201ENST00000390924 102 ntBASIC0□□□□□ -2.41
FEN1P39748 RNU6-1268P-201ENST00000391214 107 ntBASIC0□□□□□ -2.41
FEN1P39748 RNU6-1239P-201ENST00000391310 107 ntBASIC0□□□□□ -2.41
FEN1P39748 MIR548G-201ENST00000408442 89 ntBASIC0□□□□□ -2.41
FEN1P39748 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
FEN1P39748 RNU6-971P-201ENST00000516920 106 ntBASIC0□□□□□ -2.41
FEN1P39748 U7.6-201ENST00000610841 64 ntBASIC0□□□□□ -2.41
FEN1P39748 AL157777.2-201ENST00000258070 137 ntBASIC-0.01□□□□□ -2.41
FEN1P39748 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.01□□□□□ -2.41
FEN1P39748 RNU6-509P-201ENST00000363519 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms