Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNA5SP99-201ENST00000364020 114 ntBASIC3.48□□□□□ -1.85
HOXD11P31277 RNU6-246P-201ENST00000384702 107 ntBASIC3.48□□□□□ -1.85
HOXD11P31277 MIR520F-201ENST00000384824 87 ntBASIC3.48□□□□□ -1.85
HOXD11P31277 SNORA75.2-201ENST00000391138 150 ntBASIC3.48□□□□□ -1.85
HOXD11P31277 SNORA75.3-201ENST00000391231 150 ntBASIC3.48□□□□□ -1.85
HOXD11P31277 U6.103-201ENST00000637085 61 ntBASIC3.48□□□□□ -1.85
HOXD11P31277 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD11P31277 Y_RNA.282-201ENST00000364793 102 ntBASIC3.47□□□□□ -1.85
HOXD11P31277 RNU7-193P-201ENST00000516723 65 ntBASIC3.47□□□□□ -1.85
HOXD11P31277 RNU6-135P-201ENST00000516769 101 ntBASIC3.47□□□□□ -1.85
HOXD11P31277 IGKV2-26-201ENST00000518305 343 ntBASIC3.47□□□□□ -1.85
HOXD11P31277 MIR4490-201ENST00000582647 84 ntBASIC3.47□□□□□ -1.85
HOXD11P31277 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD11P31277 AC062016.1-201ENST00000355719 319 ntBASIC3.46□□□□□ -1.86
HOXD11P31277 MIR1-1-201ENST00000362147 71 ntBASIC3.46□□□□□ -1.86
HOXD11P31277 RPS29P31-201ENST00000446147 164 ntBASIC3.46□□□□□ -1.86
HOXD11P31277 AC108938.1-201ENST00000451204 136 ntBASIC3.46□□□□□ -1.86
HOXD11P31277 RNU6-518P-201ENST00000516056 96 ntBASIC3.46□□□□□ -1.86
HOXD11P31277 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD11P31277 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD11P31277 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD11P31277 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD11P31277 RNA5SP276-201ENST00000362580 94 ntBASIC3.45□□□□□ -1.86
HOXD11P31277 SNORA7.1-201ENST00000363750 139 ntBASIC3.45□□□□□ -1.86
HOXD11P31277 RNU6-1065P-201ENST00000384513 106 ntBASIC3.45□□□□□ -1.86
HOXD11P31277 MIR517C-201ENST00000385103 95 ntBASIC3.45□□□□□ -1.86
HOXD11P31277 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD11P31277 SNORA9.2-201ENST00000365361 133 ntBASIC3.44□□□□□ -1.86
HOXD11P31277 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD11P31277 RN7SL863P-201ENST00000462370 296 ntBASIC3.44□□□□□ -1.86
HOXD11P31277 RNA5SP380-201ENST00000517190 98 ntBASIC3.44□□□□□ -1.86
HOXD11P31277 AC244669.1-204ENST00000621564 178 ntBASIC3.44□□□□□ -1.86
HOXD11P31277 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD11P31277 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD11P31277 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.43□□□□□ -1.86
HOXD11P31277 AC008413.1-201ENST00000511864 177 ntBASIC3.43□□□□□ -1.86
HOXD11P31277 RNA5SP24-201ENST00000516478 95 ntBASIC3.43□□□□□ -1.86
HOXD11P31277 MIR4639-201ENST00000584938 69 ntBASIC3.43□□□□□ -1.86
HOXD11P31277 U6.96-201ENST00000636425 70 ntBASIC3.43□□□□□ -1.86
HOXD11P31277 AP000553.6-201ENST00000641242 118 ntBASIC3.43□□□□□ -1.86
HOXD11P31277 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD11P31277 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD11P31277 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXD11P31277 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD11P31277 SNORA3A-201ENST00000364113 130 ntBASIC3.42□□□□□ -1.86
HOXD11P31277 AC048334.1-201ENST00000477975 159 ntBASIC3.42□□□□□ -1.86
HOXD11P31277 MIR548AL-201ENST00000578416 97 ntBASIC3.42□□□□□ -1.86
HOXD11P31277 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HOXD11P31277 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD11P31277 AC079140.2-201ENST00000506193 142 ntBASIC3.41□□□□□ -1.86
HOXD11P31277 RNU6-469P-201ENST00000516253 101 ntBASIC3.41□□□□□ -1.86
HOXD11P31277 SCARNA17.3-201ENST00000516381 125 ntBASIC3.41□□□□□ -1.86
HOXD11P31277 RNU6-165P-201ENST00000517170 99 ntBASIC3.41□□□□□ -1.86
HOXD11P31277 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD11P31277 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD11P31277 SNORD1B-201ENST00000363091 84 ntBASIC3.4□□□□□ -1.87
HOXD11P31277 MIR644A-201ENST00000385262 94 ntBASIC3.4□□□□□ -1.87
HOXD11P31277 MIR3937-201ENST00000580135 106 ntBASIC3.4□□□□□ -1.87
HOXD11P31277 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD11P31277 AL591424.2-201ENST00000617023 128 ntBASIC3.4□□□□□ -1.87
HOXD11P31277 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXD11P31277 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD11P31277 AL591704.2-201ENST00000421658 181 ntBASIC3.39□□□□□ -1.87
HOXD11P31277 MIR2682-201ENST00000580305 110 ntBASIC3.39□□□□□ -1.87
HOXD11P31277 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
HOXD11P31277 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD11P31277 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXD11P31277 SNORD33-201ENST00000362761 85 ntBASIC3.38□□□□□ -1.87
HOXD11P31277 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD11P31277 RNA5SP385-201ENST00000515947 110 ntBASIC3.38□□□□□ -1.87
HOXD11P31277 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD11P31277 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HOXD11P31277 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.37□□□□□ -1.87
HOXD11P31277 DEFA7P-201ENST00000382676 285 ntBASIC3.37□□□□□ -1.87
HOXD11P31277 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
HOXD11P31277 snoU13.9-201ENST00000458927 103 ntBASIC3.37□□□□□ -1.87
HOXD11P31277 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
HOXD11P31277 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD11P31277 MIR429-201ENST00000362106 83 ntBASIC3.36□□□□□ -1.87
HOXD11P31277 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD11P31277 RNU6-56P-201ENST00000516986 93 ntBASIC3.35□□□□□ -1.87
HOXD11P31277 SNORD53-201ENST00000579969 78 ntBASIC3.35□□□□□ -1.87
HOXD11P31277 7SK.11-201ENST00000615477 250 ntBASIC3.35□□□□□ -1.87
HOXD11P31277 AL353997.5-201ENST00000618886 171 ntBASIC3.35□□□□□ -1.87
HOXD11P31277 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD11P31277 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD11P31277 RNU6-924P-201ENST00000362926 108 ntBASIC3.34□□□□□ -1.87
HOXD11P31277 SNORD1A-201ENST00000364968 72 ntBASIC3.34□□□□□ -1.87
HOXD11P31277 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
HOXD11P31277 Y_RNA.407-201ENST00000383986 113 ntBASIC3.34□□□□□ -1.87
HOXD11P31277 HMGN2P23-201ENST00000456759 269 ntBASIC3.34□□□□□ -1.87
HOXD11P31277 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HOXD11P31277 RNU6-726P-201ENST00000364680 107 ntBASIC3.33□□□□□ -1.88
HOXD11P31277 SNORA8.2-201ENST00000384372 139 ntBASIC3.33□□□□□ -1.88
HOXD11P31277 MIR652-201ENST00000385278 98 ntBASIC3.33□□□□□ -1.88
HOXD11P31277 MIR1289-2-201ENST00000408360 111 ntBASIC3.33□□□□□ -1.88
HOXD11P31277 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
HOXD11P31277 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HOXD11P31277 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD11P31277 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 240 ms