Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 U6.81-201ENST00000612550 106 ntBASIC2.27□□□□□ -2.05
VARSP26640 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
VARSP26640 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VARSP26640 RNU6-934P-201ENST00000365154 107 ntBASIC2.26□□□□□ -2.05
VARSP26640 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.26□□□□□ -2.05
VARSP26640 HMGN2P19-201ENST00000425149 265 ntBASIC2.26□□□□□ -2.05
VARSP26640 RNU6-881P-201ENST00000516813 102 ntBASIC2.26□□□□□ -2.05
VARSP26640 AC019176.1-201ENST00000518519 225 ntBASIC2.26□□□□□ -2.05
VARSP26640 AL096840.1-201ENST00000603287 93 ntBASIC2.26□□□□□ -2.05
VARSP26640 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.26□□□□□ -2.05
VARSP26640 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.26□□□□□ -2.05
VARSP26640 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
VARSP26640 Y_RNA.330-201ENST00000365230 109 ntBASIC2.25□□□□□ -2.05
VARSP26640 SNORA24B-201ENST00000384176 131 ntBASIC2.25□□□□□ -2.05
VARSP26640 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
VARSP26640 MIR4771-2-201ENST00000577758 74 ntBASIC2.25□□□□□ -2.05
VARSP26640 MIR4771-1-201ENST00000582617 74 ntBASIC2.25□□□□□ -2.05
VARSP26640 MIR8053-201ENST00000613344 75 ntBASIC2.25□□□□□ -2.05
VARSP26640 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.25□□□□□ -2.05
VARSP26640 AL359851.1-201ENST00000569460 4997 ntBASIC2.24□□□□□ -2.05
VARSP26640 SNORD115-22-201ENST00000364456 82 ntBASIC2.24□□□□□ -2.05
VARSP26640 Y_RNA.443-201ENST00000384135 111 ntBASIC2.24□□□□□ -2.05
VARSP26640 MIR125B2-201ENST00000385128 89 ntBASIC2.24□□□□□ -2.05
VARSP26640 RPL23AP42-201ENST00000471152 471 ntBASIC2.24□□□□□ -2.05
VARSP26640 MIR3664-201ENST00000579074 99 ntBASIC2.24□□□□□ -2.05
VARSP26640 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
VARSP26640 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VARSP26640 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VARSP26640 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VARSP26640 SNORA25.4-201ENST00000363666 124 ntBASIC2.23□□□□□ -2.05
VARSP26640 SNORD113.3-201ENST00000364630 78 ntBASIC2.23□□□□□ -2.05
VARSP26640 MIR676-201ENST00000390702 67 ntBASIC2.23□□□□□ -2.05
VARSP26640 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
VARSP26640 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
VARSP26640 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
VARSP26640 SNORD114-1-201ENST00000362705 72 ntBASIC2.22□□□□□ -2.05
VARSP26640 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VARSP26640 AL591806.2-201ENST00000433122 173 ntBASIC2.22□□□□□ -2.05
VARSP26640 RNU6-1057P-201ENST00000517162 102 ntBASIC2.22□□□□□ -2.05
VARSP26640 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
VARSP26640 RNA5SP245-201ENST00000364239 121 ntBASIC2.21□□□□□ -2.06
VARSP26640 RNU6-535P-201ENST00000384722 107 ntBASIC2.21□□□□□ -2.06
VARSP26640 RNU6-987P-201ENST00000384759 104 ntBASIC2.21□□□□□ -2.06
VARSP26640 snoU13.9-201ENST00000458927 103 ntBASIC2.21□□□□□ -2.06
VARSP26640 RNU6-1265P-201ENST00000516342 103 ntBASIC2.21□□□□□ -2.06
VARSP26640 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
VARSP26640 MIR4773-1-201ENST00000637203 78 ntBASIC2.21□□□□□ -2.06
VARSP26640 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VARSP26640 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VARSP26640 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VARSP26640 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VARSP26640 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VARSP26640 SNORD1A-201ENST00000364968 72 ntBASIC2.2□□□□□ -2.06
VARSP26640 RNU6-1177P-201ENST00000391058 104 ntBASIC2.2□□□□□ -2.06
VARSP26640 RNU4-37P-201ENST00000410214 84 ntBASIC2.2□□□□□ -2.06
VARSP26640 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
VARSP26640 AC079140.2-201ENST00000506193 142 ntBASIC2.2□□□□□ -2.06
VARSP26640 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
VARSP26640 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VARSP26640 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VARSP26640 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
VARSP26640 RNU6-1216P-201ENST00000362590 107 ntBASIC2.19□□□□□ -2.06
VARSP26640 SNORD113.1-201ENST00000363280 73 ntBASIC2.19□□□□□ -2.06
VARSP26640 RNU6-604P-201ENST00000390917 100 ntBASIC2.19□□□□□ -2.06
VARSP26640 RNU6-165P-201ENST00000517170 99 ntBASIC2.19□□□□□ -2.06
VARSP26640 AC036111.3-201ENST00000526389 112 ntBASIC2.19□□□□□ -2.06
VARSP26640 AL645939.4-201ENST00000604495 135 ntBASIC2.19□□□□□ -2.06
VARSP26640 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VARSP26640 MIR302D-201ENST00000362275 68 ntBASIC2.18□□□□□ -2.06
VARSP26640 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
VARSP26640 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.18□□□□□ -2.06
VARSP26640 MIR3937-201ENST00000580135 106 ntBASIC2.18□□□□□ -2.06
VARSP26640 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.18□□□□□ -2.06
VARSP26640 RNU6-499P-201ENST00000365615 107 ntBASIC2.17□□□□□ -2.06
VARSP26640 RNU6-364P-201ENST00000384387 107 ntBASIC2.17□□□□□ -2.06
VARSP26640 SNORD116-24-201ENST00000384549 92 ntBASIC2.17□□□□□ -2.06
VARSP26640 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
VARSP26640 RNU6-274P-201ENST00000459566 107 ntBASIC2.17□□□□□ -2.06
VARSP26640 RNU6-287P-201ENST00000516230 98 ntBASIC2.17□□□□□ -2.06
VARSP26640 RNU6-548P-201ENST00000517083 115 ntBASIC2.17□□□□□ -2.06
VARSP26640 AC103810.8-201ENST00000607347 118 ntBASIC2.17□□□□□ -2.06
VARSP26640 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.17□□□□□ -2.06
VARSP26640 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VARSP26640 RNU6-382P-201ENST00000365181 106 ntBASIC2.16□□□□□ -2.06
VARSP26640 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
VARSP26640 RNU6-1065P-201ENST00000384513 106 ntBASIC2.16□□□□□ -2.06
VARSP26640 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
VARSP26640 RNU6-717P-201ENST00000459076 104 ntBASIC2.16□□□□□ -2.06
VARSP26640 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
VARSP26640 MIR6132-201ENST00000622083 109 ntBASIC2.16□□□□□ -2.06
VARSP26640 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.16□□□□□ -2.06
VARSP26640 MIR30A-201ENST00000385092 71 ntBASIC2.15□□□□□ -2.07
VARSP26640 RPS26P5-201ENST00000418544 335 ntBASIC2.15□□□□□ -2.07
VARSP26640 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
VARSP26640 AC048334.1-201ENST00000477975 159 ntBASIC2.15□□□□□ -2.07
VARSP26640 RNU7-40P-201ENST00000516397 64 ntBASIC2.15□□□□□ -2.07
VARSP26640 MIR4676-201ENST00000583078 72 ntBASIC2.15□□□□□ -2.07
VARSP26640 AC008608.1-201ENST00000603910 127 ntBASIC2.15□□□□□ -2.07
VARSP26640 uc_338.20-201ENST00000621563 178 ntBASIC2.15□□□□□ -2.07
VARSP26640 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms