Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
NID1P14543 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NID1P14543 MIR8063-201ENST00000621930 81 ntBASIC1.97□□□□□ -2.09
NID1P14543 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NID1P14543 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NID1P14543 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NID1P14543 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NID1P14543 SNORD45.1-201ENST00000363181 77 ntBASIC1.96□□□□□ -2.1
NID1P14543 Y_RNA.164-201ENST00000363709 102 ntBASIC1.96□□□□□ -2.1
NID1P14543 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
NID1P14543 Y_RNA.443-201ENST00000384135 111 ntBASIC1.96□□□□□ -2.1
NID1P14543 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
NID1P14543 RNU6-987P-201ENST00000384759 104 ntBASIC1.96□□□□□ -2.1
NID1P14543 MIR451A-201ENST00000385059 72 ntBASIC1.96□□□□□ -2.1
NID1P14543 RNA5SP247-201ENST00000411181 105 ntBASIC1.96□□□□□ -2.1
NID1P14543 SNORD83.1-201ENST00000411362 77 ntBASIC1.96□□□□□ -2.1
NID1P14543 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
NID1P14543 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
NID1P14543 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
NID1P14543 snoU13.21-201ENST00000459368 105 ntBASIC1.96□□□□□ -2.1
NID1P14543 RNU6-881P-201ENST00000516813 102 ntBASIC1.96□□□□□ -2.1
NID1P14543 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.96□□□□□ -2.1
NID1P14543 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NID1P14543 MIR337-201ENST00000362281 93 ntBASIC1.95□□□□□ -2.1
NID1P14543 RNU6-824P-201ENST00000363724 104 ntBASIC1.95□□□□□ -2.1
NID1P14543 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
NID1P14543 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
NID1P14543 RNU6-1052P-201ENST00000411398 104 ntBASIC1.95□□□□□ -2.1
NID1P14543 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
NID1P14543 RNU6-719P-201ENST00000516671 104 ntBASIC1.95□□□□□ -2.1
NID1P14543 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
NID1P14543 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NID1P14543 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NID1P14543 Y_RNA.338-201ENST00000365320 114 ntBASIC1.94□□□□□ -2.1
NID1P14543 MIR3664-201ENST00000579074 99 ntBASIC1.94□□□□□ -2.1
NID1P14543 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
NID1P14543 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.94□□□□□ -2.1
NID1P14543 RNU6-934P-201ENST00000365154 107 ntBASIC1.93□□□□□ -2.1
NID1P14543 MIR9-2-201ENST00000384838 87 ntBASIC1.93□□□□□ -2.1
NID1P14543 MIR125B2-201ENST00000385128 89 ntBASIC1.93□□□□□ -2.1
NID1P14543 RNU4-37P-201ENST00000410214 84 ntBASIC1.93□□□□□ -2.1
NID1P14543 MIR2113-201ENST00000459007 91 ntBASIC1.93□□□□□ -2.1
NID1P14543 RNU6-1265P-201ENST00000516342 103 ntBASIC1.93□□□□□ -2.1
NID1P14543 RNU6-1057P-201ENST00000517162 102 ntBASIC1.93□□□□□ -2.1
NID1P14543 MIR4713-201ENST00000582691 75 ntBASIC1.93□□□□□ -2.1
NID1P14543 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.93□□□□□ -2.1
NID1P14543 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
NID1P14543 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.92□□□□□ -2.1
NID1P14543 SNORD115-22-201ENST00000364456 82 ntBASIC1.92□□□□□ -2.1
NID1P14543 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NID1P14543 MIR4771-2-201ENST00000577758 74 ntBASIC1.92□□□□□ -2.1
NID1P14543 MIR4771-1-201ENST00000582617 74 ntBASIC1.92□□□□□ -2.1
NID1P14543 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NID1P14543 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NID1P14543 RNU6-1216P-201ENST00000362590 107 ntBASIC1.91□□□□□ -2.1
NID1P14543 SNORD113.3-201ENST00000364630 78 ntBASIC1.91□□□□□ -2.1
NID1P14543 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.91□□□□□ -2.1
NID1P14543 RNU6-717P-201ENST00000459076 104 ntBASIC1.91□□□□□ -2.1
NID1P14543 RNU6-274P-201ENST00000459566 107 ntBASIC1.91□□□□□ -2.1
NID1P14543 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
NID1P14543 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
NID1P14543 AC019176.1-201ENST00000518519 225 ntBASIC1.91□□□□□ -2.1
NID1P14543 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NID1P14543 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NID1P14543 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
NID1P14543 Y_RNA.330-201ENST00000365230 109 ntBASIC1.9□□□□□ -2.11
NID1P14543 RNU6-1177P-201ENST00000391058 104 ntBASIC1.9□□□□□ -2.11
NID1P14543 AC079804.2-201ENST00000490376 200 ntBASIC1.9□□□□□ -2.11
NID1P14543 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
NID1P14543 SNORD113.1-201ENST00000363280 73 ntBASIC1.89□□□□□ -2.11
NID1P14543 RNU6-499P-201ENST00000365615 107 ntBASIC1.89□□□□□ -2.11
NID1P14543 RNU6-1065P-201ENST00000384513 106 ntBASIC1.89□□□□□ -2.11
NID1P14543 RNU6-535P-201ENST00000384722 107 ntBASIC1.89□□□□□ -2.11
NID1P14543 RNU6-604P-201ENST00000390917 100 ntBASIC1.89□□□□□ -2.11
NID1P14543 U3.27-201ENST00000391237 200 ntBASIC1.89□□□□□ -2.11
NID1P14543 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
NID1P14543 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
NID1P14543 AC079140.2-201ENST00000506193 142 ntBASIC1.89□□□□□ -2.11
NID1P14543 RNU6-752P-201ENST00000516376 102 ntBASIC1.89□□□□□ -2.11
NID1P14543 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
NID1P14543 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.89□□□□□ -2.11
NID1P14543 MIR4773-1-201ENST00000637203 78 ntBASIC1.89□□□□□ -2.11
NID1P14543 SNORD33-201ENST00000362761 85 ntBASIC1.88□□□□□ -2.11
NID1P14543 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
NID1P14543 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
NID1P14543 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
NID1P14543 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
NID1P14543 AC103706.3-201ENST00000636297 85 ntBASIC1.88□□□□□ -2.11
NID1P14543 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NID1P14543 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
NID1P14543 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NID1P14543 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
NID1P14543 SNORD1A-201ENST00000364968 72 ntBASIC1.87□□□□□ -2.11
NID1P14543 RNU6-165P-201ENST00000517170 99 ntBASIC1.87□□□□□ -2.11
NID1P14543 AC036111.3-201ENST00000526389 112 ntBASIC1.87□□□□□ -2.11
NID1P14543 MIR3937-201ENST00000580135 106 ntBASIC1.87□□□□□ -2.11
NID1P14543 MIR4511-201ENST00000582784 87 ntBASIC1.87□□□□□ -2.11
NID1P14543 AP000553.5-201ENST00000641933 54 ntBASIC1.87□□□□□ -2.11
NID1P14543 RNA5SP245-201ENST00000364239 121 ntBASIC1.86□□□□□ -2.11
NID1P14543 SNORD115-44-201ENST00000365391 82 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms