Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.74-201ENST00000362911 99 ntBASIC-5.06□□□□□ -3.22
TOP2AP11388 AC024067.1-201ENST00000426199 223 ntBASIC-5.06□□□□□ -3.22
TOP2AP11388 RNU6-864P-201ENST00000516256 108 ntBASIC-5.06□□□□□ -3.22
TOP2AP11388 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-5.06□□□□□ -3.22
TOP2AP11388 U2.18-201ENST00000622185 84 ntBASIC-5.06□□□□□ -3.22
TOP2AP11388 Y_RNA.398-201ENST00000383952 99 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 SNORD115.1-201ENST00000391109 76 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 SNORD77B-201ENST00000391112 67 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 MTND5P26-201ENST00000426018 1752 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 RPS29P25-201ENST00000481709 171 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 RNU6-807P-201ENST00000516805 107 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 AC024933.1-201ENST00000608472 348 ntBASIC-5.07□□□□□ -3.22
TOP2AP11388 RNU6-309P-201ENST00000364573 106 ntBASIC-5.08□□□□□ -3.22
TOP2AP11388 Y_RNA.542-201ENST00000384641 111 ntBASIC-5.08□□□□□ -3.22
TOP2AP11388 AL691482.2-201ENST00000457453 84 ntBASIC-5.08□□□□□ -3.22
TOP2AP11388 AL022161.1-201ENST00000604390 213 ntBASIC-5.08□□□□□ -3.22
TOP2AP11388 MRPS35P2-201ENST00000508242 191 ntBASIC-5.09□□□□□ -3.22
TOP2AP11388 RNU6-570P-201ENST00000517051 105 ntBASIC-5.09□□□□□ -3.22
TOP2AP11388 Y_RNA.72-201ENST00000362894 103 ntBASIC-5.1□□□□□ -3.23
TOP2AP11388 Y_RNA.578-201ENST00000390903 88 ntBASIC-5.1□□□□□ -3.23
TOP2AP11388 MTCO2P24-201ENST00000515611 426 ntBASIC-5.1□□□□□ -3.23
TOP2AP11388 AC092954.2-201ENST00000609103 430 ntBASIC-5.1□□□□□ -3.23
TOP2AP11388 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.11□□□□□ -3.23
TOP2AP11388 MIR548A3-201ENST00000385297 97 ntBASIC-5.11□□□□□ -3.23
TOP2AP11388 AC016550.1-201ENST00000505348 785 ntBASIC-5.11□□□□□ -3.23
TOP2AP11388 MIR4536-1-201ENST00000583537 88 ntBASIC-5.11□□□□□ -3.23
TOP2AP11388 MIR16-2-201ENST00000362117 81 ntBASIC-5.12□□□□□ -3.23
TOP2AP11388 RNU6-530P-201ENST00000391180 107 ntBASIC-5.12□□□□□ -3.23
TOP2AP11388 AC019193.3-201ENST00000609144 554 ntBASIC-5.12□□□□□ -3.23
TOP2AP11388 U2.7-201ENST00000619197 100 ntBASIC-5.12□□□□□ -3.23
TOP2AP11388 AC090617.10-201ENST00000624308 134 ntBASIC-5.12□□□□□ -3.23
TOP2AP11388 Y_RNA.282-201ENST00000364793 102 ntBASIC-5.13□□□□□ -3.23
TOP2AP11388 Y_RNA.434-201ENST00000384090 100 ntBASIC-5.13□□□□□ -3.23
TOP2AP11388 RNU6-74P-201ENST00000384235 107 ntBASIC-5.13□□□□□ -3.23
TOP2AP11388 MIR548N-201ENST00000408742 75 ntBASIC-5.13□□□□□ -3.23
TOP2AP11388 RNU2-35P-201ENST00000516446 142 ntBASIC-5.13□□□□□ -3.23
TOP2AP11388 SCARNA15-202ENST00000516881 127 ntBASIC-5.13□□□□□ -3.23
TOP2AP11388 MIR379-201ENST00000362218 67 ntBASIC-5.14□□□□□ -3.23
TOP2AP11388 Y_RNA.63-201ENST00000362841 102 ntBASIC-5.14□□□□□ -3.23
TOP2AP11388 RNU6-616P-201ENST00000384353 107 ntBASIC-5.14□□□□□ -3.23
TOP2AP11388 RNU6-65P-201ENST00000516332 98 ntBASIC-5.14□□□□□ -3.23
TOP2AP11388 MIR4773-1-201ENST00000637203 78 ntBASIC-5.14□□□□□ -3.23
TOP2AP11388 RNU6-157P-201ENST00000383957 107 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 RNU6-308P-201ENST00000390957 107 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 RNU7-87P-201ENST00000459343 62 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 AC112204.1-201ENST00000502591 103 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 RNU6-1299P-201ENST00000516316 100 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 SNORD27.1-201ENST00000516319 72 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 MIR3942-201ENST00000585264 109 ntBASIC-5.15□□□□□ -3.23
TOP2AP11388 RNU6-626P-201ENST00000363354 107 ntBASIC-5.16□□□□□ -3.24
TOP2AP11388 Y_RNA.357-201ENST00000365487 109 ntBASIC-5.16□□□□□ -3.24
TOP2AP11388 AC138393.2-201ENST00000414742 246 ntBASIC-5.16□□□□□ -3.24
TOP2AP11388 RNU7-187P-201ENST00000458985 68 ntBASIC-5.16□□□□□ -3.24
TOP2AP11388 AC107308.1-201ENST00000615897 301 ntBASIC-5.16□□□□□ -3.24
TOP2AP11388 RNU6-595P-201ENST00000363944 107 ntBASIC-5.17□□□□□ -3.24
TOP2AP11388 Y_RNA.279-201ENST00000364763 95 ntBASIC-5.17□□□□□ -3.24
TOP2AP11388 RNU5E-4P-201ENST00000364931 120 ntBASIC-5.17□□□□□ -3.24
TOP2AP11388 RNU6-809P-201ENST00000384461 107 ntBASIC-5.17□□□□□ -3.24
TOP2AP11388 RNU6-1081P-201ENST00000384537 107 ntBASIC-5.17□□□□□ -3.24
TOP2AP11388 Y_RNA.639-201ENST00000458981 102 ntBASIC-5.17□□□□□ -3.24
TOP2AP11388 RNU6-236P-201ENST00000363886 106 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 MTND4LP7-201ENST00000431728 294 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 RNU6-645P-201ENST00000364649 106 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 SNORD116-11-201ENST00000383882 92 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 SNORD115-47-201ENST00000391226 86 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 Y_RNA.668-201ENST00000516233 93 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 RNA5SP153-201ENST00000516498 76 ntBASIC-5.18□□□□□ -3.24
TOP2AP11388 RNU6-1205P-201ENST00000363625 106 ntBASIC-5.19□□□□□ -3.24
TOP2AP11388 Y_RNA.409-201ENST00000383990 98 ntBASIC-5.19□□□□□ -3.24
TOP2AP11388 AL593851.1-201ENST00000426171 157 ntBASIC-5.19□□□□□ -3.24
TOP2AP11388 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-5.19□□□□□ -3.24
TOP2AP11388 IGHVII-40-1-201ENST00000517316 58 ntBASIC-5.19□□□□□ -3.24
TOP2AP11388 MIR5692C1-201ENST00000585309 91 ntBASIC-5.19□□□□□ -3.24
TOP2AP11388 RNU6-899P-201ENST00000363947 107 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 RNU6-816P-201ENST00000390914 107 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 RNU6-1268P-201ENST00000391214 107 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 RNU6-1239P-201ENST00000391310 107 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 RNU2-55P-201ENST00000411146 174 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 SNORD63.2-201ENST00000516303 64 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 MIR5583-1-201ENST00000580941 59 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 AL157392.4-201ENST00000609756 345 ntBASIC-5.2□□□□□ -3.24
TOP2AP11388 RNU6-1051P-201ENST00000365471 102 ntBASIC-5.21□□□□□ -3.24
TOP2AP11388 RNU6-669P-201ENST00000365575 107 ntBASIC-5.21□□□□□ -3.24
TOP2AP11388 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.21□□□□□ -3.24
TOP2AP11388 MIR1-2-201ENST00000384961 85 ntBASIC-5.22□□□□□ -3.24
TOP2AP11388 AC083798.1-201ENST00000472671 131 ntBASIC-5.22□□□□□ -3.24
TOP2AP11388 SNORA19.3-201ENST00000516165 130 ntBASIC-5.22□□□□□ -3.24
TOP2AP11388 Y_RNA.691-201ENST00000516611 103 ntBASIC-5.22□□□□□ -3.24
TOP2AP11388 RNU5B-4P-201ENST00000363508 111 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 SNORD115-37-201ENST00000363768 82 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 Y_RNA.401-201ENST00000383965 117 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 MIR1254-1-201ENST00000408257 97 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 DEFB117-201ENST00000602356 141 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 HULC.1-201ENST00000612720 240 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 DLEU2_5.1-201ENST00000615567 84 ntBASIC-5.23□□□□□ -3.25
TOP2AP11388 RNY3P3-201ENST00000363816 102 ntBASIC-5.24□□□□□ -3.25
TOP2AP11388 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-5.24□□□□□ -3.25
TOP2AP11388 Y_RNA.604-201ENST00000410574 102 ntBASIC-5.24□□□□□ -3.25
TOP2AP11388 RNU6-445P-201ENST00000516949 107 ntBASIC-5.24□□□□□ -3.25
Retrieved 100 of 98,524 protein–RNA pairs in 334.1 ms