Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-1265P-201ENST00000516342 103 ntBASIC2.05□□□□□ -2.08
THBS1P07996 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
THBS1P07996 RNU6-881P-201ENST00000516813 102 ntBASIC2.05□□□□□ -2.08
THBS1P07996 MIR3140-201ENST00000583685 90 ntBASIC2.05□□□□□ -2.08
THBS1P07996 MIR8063-201ENST00000621930 81 ntBASIC2.05□□□□□ -2.08
THBS1P07996 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
THBS1P07996 SNORD45.1-201ENST00000363181 77 ntBASIC2.04□□□□□ -2.08
THBS1P07996 RNU6-934P-201ENST00000365154 107 ntBASIC2.04□□□□□ -2.08
THBS1P07996 Y_RNA.443-201ENST00000384135 111 ntBASIC2.04□□□□□ -2.08
THBS1P07996 RNU6-987P-201ENST00000384759 104 ntBASIC2.04□□□□□ -2.08
THBS1P07996 snoU13.9-201ENST00000458927 103 ntBASIC2.04□□□□□ -2.08
THBS1P07996 RNU6-274P-201ENST00000459566 107 ntBASIC2.04□□□□□ -2.08
THBS1P07996 Y_RNA.676-201ENST00000516393 96 ntBASIC2.04□□□□□ -2.08
THBS1P07996 MIR6132-201ENST00000622083 109 ntBASIC2.04□□□□□ -2.08
THBS1P07996 AC103706.3-201ENST00000636297 85 ntBASIC2.04□□□□□ -2.08
THBS1P07996 SNORD115-44-201ENST00000365391 82 ntBASIC2.03□□□□□ -2.08
THBS1P07996 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
THBS1P07996 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
THBS1P07996 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.03□□□□□ -2.08
THBS1P07996 AC079140.2-201ENST00000506193 142 ntBASIC2.03□□□□□ -2.08
THBS1P07996 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
THBS1P07996 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
THBS1P07996 RNU6-1216P-201ENST00000362590 107 ntBASIC2.02□□□□□ -2.09
THBS1P07996 MTND4LP19-201ENST00000403051 166 ntBASIC2.02□□□□□ -2.09
THBS1P07996 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
THBS1P07996 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
THBS1P07996 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
THBS1P07996 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
THBS1P07996 MIR216B-201ENST00000390186 82 ntBASIC2.01□□□□□ -2.09
THBS1P07996 RNU6-1177P-201ENST00000391058 104 ntBASIC2.01□□□□□ -2.09
THBS1P07996 RNU4-37P-201ENST00000410214 84 ntBASIC2.01□□□□□ -2.09
THBS1P07996 SNORD83.1-201ENST00000411362 77 ntBASIC2.01□□□□□ -2.09
THBS1P07996 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
THBS1P07996 snoU13.23-201ENST00000458863 104 ntBASIC2.01□□□□□ -2.09
THBS1P07996 RNU6-824P-201ENST00000363724 104 ntBASIC2□□□□□ -2.09
THBS1P07996 SNORD45A-201ENST00000384512 84 ntBASIC2□□□□□ -2.09
THBS1P07996 SNORD111-201ENST00000408139 94 ntBASIC2□□□□□ -2.09
THBS1P07996 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
THBS1P07996 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2□□□□□ -2.09
THBS1P07996 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
THBS1P07996 RNU6-499P-201ENST00000365615 107 ntBASIC1.99□□□□□ -2.09
THBS1P07996 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.99□□□□□ -2.09
THBS1P07996 MIR4771-2-201ENST00000577758 74 ntBASIC1.99□□□□□ -2.09
THBS1P07996 MIR3937-201ENST00000580135 106 ntBASIC1.99□□□□□ -2.09
THBS1P07996 MIR4771-1-201ENST00000582617 74 ntBASIC1.99□□□□□ -2.09
THBS1P07996 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.99□□□□□ -2.09
THBS1P07996 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
THBS1P07996 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
THBS1P07996 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
THBS1P07996 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
THBS1P07996 MIR302D-201ENST00000362275 68 ntBASIC1.98□□□□□ -2.09
THBS1P07996 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
THBS1P07996 RNU6-364P-201ENST00000384387 107 ntBASIC1.98□□□□□ -2.09
THBS1P07996 RNU6-535P-201ENST00000384722 107 ntBASIC1.98□□□□□ -2.09
THBS1P07996 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
THBS1P07996 AC244505.6-201ENST00000452829 130 ntBASIC1.98□□□□□ -2.09
THBS1P07996 MIR4511-201ENST00000582784 87 ntBASIC1.98□□□□□ -2.09
THBS1P07996 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
THBS1P07996 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
THBS1P07996 SNORD115-22-201ENST00000364456 82 ntBASIC1.97□□□□□ -2.09
THBS1P07996 SNORD1A-201ENST00000364968 72 ntBASIC1.97□□□□□ -2.09
THBS1P07996 Y_RNA.330-201ENST00000365230 109 ntBASIC1.97□□□□□ -2.09
THBS1P07996 RNA5SP233-201ENST00000459153 113 ntBASIC1.97□□□□□ -2.09
THBS1P07996 AL645939.4-201ENST00000604495 135 ntBASIC1.97□□□□□ -2.09
THBS1P07996 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.97□□□□□ -2.09
THBS1P07996 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.97□□□□□ -2.09
THBS1P07996 SNORD113.1-201ENST00000363280 73 ntBASIC1.96□□□□□ -2.1
THBS1P07996 MIR938-201ENST00000401216 83 ntBASIC1.96□□□□□ -2.1
THBS1P07996 RNA5SP247-201ENST00000411181 105 ntBASIC1.96□□□□□ -2.1
THBS1P07996 RNU6-1052P-201ENST00000411398 104 ntBASIC1.96□□□□□ -2.1
THBS1P07996 RPS26P5-201ENST00000418544 335 ntBASIC1.96□□□□□ -2.1
THBS1P07996 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
THBS1P07996 snoU13.21-201ENST00000459368 105 ntBASIC1.96□□□□□ -2.1
THBS1P07996 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
THBS1P07996 RNU6-719P-201ENST00000516671 104 ntBASIC1.96□□□□□ -2.1
THBS1P07996 AC036111.3-201ENST00000526389 112 ntBASIC1.96□□□□□ -2.1
THBS1P07996 AC008608.1-201ENST00000603910 127 ntBASIC1.96□□□□□ -2.1
THBS1P07996 AC069503.3-201ENST00000618674 145 ntBASIC1.96□□□□□ -2.1
THBS1P07996 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
THBS1P07996 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
THBS1P07996 AC019176.1-201ENST00000518519 225 ntBASIC1.95□□□□□ -2.1
THBS1P07996 AC106800.4-201ENST00000614905 153 ntBASIC1.95□□□□□ -2.1
THBS1P07996 MIR4773-1-201ENST00000637203 78 ntBASIC1.95□□□□□ -2.1
THBS1P07996 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
THBS1P07996 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
THBS1P07996 RNU6-669P-201ENST00000365575 107 ntBASIC1.94□□□□□ -2.1
THBS1P07996 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
THBS1P07996 RNU6-604P-201ENST00000390917 100 ntBASIC1.94□□□□□ -2.1
THBS1P07996 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
THBS1P07996 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
THBS1P07996 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
THBS1P07996 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
THBS1P07996 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
THBS1P07996 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
THBS1P07996 AC244098.3-201ENST00000424803 96 ntBASIC1.93□□□□□ -2.1
THBS1P07996 RNU6-287P-201ENST00000516230 98 ntBASIC1.93□□□□□ -2.1
THBS1P07996 AC015712.3-201ENST00000559380 164 ntBASIC1.93□□□□□ -2.1
THBS1P07996 MIR4676-201ENST00000583078 72 ntBASIC1.93□□□□□ -2.1
THBS1P07996 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
THBS1P07996 AP000553.5-201ENST00000641933 54 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms