Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL133373.1-201ENST00000497098 94 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 MIR4513-201ENST00000581077 86 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 MIR3140-201ENST00000583685 90 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 AC013244.2-201ENST00000603396 103 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 MTRNR2L2-201ENST00000604882 87 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 U6.100-201ENST00000636230 99 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
TRIM13O60858 MIR103A2-201ENST00000362154 78 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 Y_RNA.56-201ENST00000362798 112 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 RNA5SP264-201ENST00000363115 107 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 RNU6-681P-201ENST00000364012 104 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 SNORD101-201ENST00000384027 73 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 RNU6-987P-201ENST00000384759 104 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRIM13O60858 AC092628.1-201ENST00000436250 252 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 AC093423.1-201ENST00000440817 142 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.65□□□□□ -2.15
TRIM13O60858 SNORA24B-201ENST00000384176 131 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 RNU6-1065P-201ENST00000384513 106 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 AC097635.1-201ENST00000450678 155 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 RNU6-947P-201ENST00000516264 106 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 MIR3675-201ENST00000583661 73 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 U6.81-201ENST00000612550 106 ntBASIC1.64□□□□□ -2.15
TRIM13O60858 SNORD1A-201ENST00000364968 72 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 RNU6-630P-201ENST00000391258 106 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 MTND4LP19-201ENST00000403051 166 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 RNU7-185P-201ENST00000459215 60 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 AC097510.1-201ENST00000510945 133 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 RPL23AP94-201ENST00000512518 302 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.63□□□□□ -2.15
TRIM13O60858 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM13O60858 MIR6082-201ENST00000613604 109 ntBASIC1.63□□□□□ -2.15
TRIM13O60858 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM13O60858 Y_RNA.13-201ENST00000362403 112 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 SNORA25.4-201ENST00000363666 124 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 SNORD45A-201ENST00000384512 84 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 MIR9-2-201ENST00000384838 87 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 RNU4-37P-201ENST00000410214 84 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 RNU6-935P-201ENST00000410371 100 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 RNU6-1054P-201ENST00000411293 104 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 Y_RNA.697-201ENST00000516776 113 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 RNU6-765P-201ENST00000516916 99 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
TRIM13O60858 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TRIM13O60858 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM13O60858 AC023934.1-201ENST00000574529 2389 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 RNU6-824P-201ENST00000363724 104 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 RNU6-895P-201ENST00000384125 103 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 Y_RNA.443-201ENST00000384135 111 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 MIR1257-201ENST00000408490 117 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 MIR3937-201ENST00000580135 106 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
TRIM13O60858 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
TRIM13O60858 MIR337-201ENST00000362281 93 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 SNORD115-22-201ENST00000364456 82 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 snoU13.21-201ENST00000459368 105 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 RNU6-1265P-201ENST00000516342 103 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 RNU6-881P-201ENST00000516813 102 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 MIR8053-201ENST00000613344 75 ntBASIC1.6□□□□□ -2.15
TRIM13O60858 RNA5SP126-201ENST00000365092 109 ntBASIC1.59□□□□□ -2.15
TRIM13O60858 MIR599-201ENST00000385069 95 ntBASIC1.59□□□□□ -2.15
TRIM13O60858 RNU1-41P-201ENST00000516161 162 ntBASIC1.59□□□□□ -2.15
TRIM13O60858 RNU1-48P-201ENST00000516400 162 ntBASIC1.59□□□□□ -2.15
TRIM13O60858 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
TRIM13O60858 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
TRIM13O60858 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TRIM13O60858 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TRIM13O60858 U8.2-201ENST00000363156 134 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 SNORD45.1-201ENST00000363181 77 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 SNORA70B-201ENST00000384210 135 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 SNORD116-24-201ENST00000384549 92 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 MIR451A-201ENST00000385059 72 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
TRIM13O60858 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM13O60858 RNU6-499P-201ENST00000365615 107 ntBASIC1.57□□□□□ -2.16
TRIM13O60858 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
TRIM13O60858 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.57□□□□□ -2.16
TRIM13O60858 AC138907.6-201ENST00000568401 126 ntBASIC1.57□□□□□ -2.16
TRIM13O60858 AC138869.1-201ENST00000568623 124 ntBASIC1.57□□□□□ -2.16
TRIM13O60858 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.57□□□□□ -2.16
TRIM13O60858 RNU6-604P-201ENST00000390917 100 ntBASIC1.56□□□□□ -2.16
TRIM13O60858 SNORD83.1-201ENST00000411362 77 ntBASIC1.56□□□□□ -2.16
TRIM13O60858 RNU6-1052P-201ENST00000411398 104 ntBASIC1.56□□□□□ -2.16
TRIM13O60858 RNU6-719P-201ENST00000516671 104 ntBASIC1.56□□□□□ -2.16
TRIM13O60858 MIR4511-201ENST00000582784 87 ntBASIC1.56□□□□□ -2.16
TRIM13O60858 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRIM13O60858 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM13O60858 RNU6-1216P-201ENST00000362590 107 ntBASIC1.55□□□□□ -2.16
TRIM13O60858 SNORD113.1-201ENST00000363280 73 ntBASIC1.55□□□□□ -2.16
TRIM13O60858 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM13O60858 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms